G1270669 (psme2)


Basic Information

Item Value
gene id G1270669
gene name psme2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 23445838 ~ 23451494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1451647
TAAACATTAAAGATGCGTTTATTAGCATGAATAAAAGAAACTGACAAATCTGGACAAAGCCAAGCAGCTTTGTTGCAGATGTACAAACAGGACTGATTGGTATAGTAGGACACCAAAGGATGGAAATTAAACAAGTCTGCTAGCCTGAGGCTAGTAGAAAATGTACCAAACTAGGCCGCTAGCTAAATTCTCTCATTTCAAATATCACATGGCATAGAACAATGTCACCCGGGTTATTTCAAACTGTGGTCTAATAGCCTGGCTGGCCAGTCCCAACAATCCTTATAATCCATCTCTTAGTATACCCCTGAAAAATGTCACATTGTTGAGCCTGACTATTCTTTCATTCCTCCACTTTATGCATATCTCAGTACATTGAGGGCTTTTCTTCTCCTTTCGGATTAGTGACTTTTTCCAGGTTCTTGCTGATGATGTCATACAGTTCCGCATAGAAGCCACGGATGTCCAGAAGGATGACTCTGAtgtcagagtaaacagcctcatcCTTCTCATGGACCAGAGAGCGGTAGTCCATCACATGAGTTAACTTGGAAGCTTTAGCCACTGCATCACCCCTCTCTGAAAAGTACTTGTTAATGTTGGTGTGGAAGCCGTCCACTTTGGTCTTCACTGCAGCTATTCTTTCCAAGATTTTCTCCTGGATTGCAACGCCAAAGTCATTCCCATCCTCTATTTTGGGGATGAGATGCTGAATCCAGCAGGACACTGTAATGATTGTCTCCCTCAGTGCTAGGATCTCTGGTTTGACTCTGTCAAGCAGCTTCACAATCTTCTCATTCCCTTTGATGAAGCCACATTTTGGAGCCTTCTTCTTATCATCATCATTCTTGTCAGTCTCCATTTCCTCATCCTCTGGAGTAGGAGGGTCTGGTATAGGGATGTCTAGAGGAGCATGGAGAGTGGACAGGTCTGTGATGCTGAGATCCTCCTCCTTCAGCAGGTTGTCCAGTTGGGTGATCTTCAATGGGATGTAGTTTGAAAACAGATCCTCTGcCTGTTGATACAGAGACTGGCGGAAGTTCTCCACCTTCACTGCGTTTATAGTTTTTATTTTCAGTACAGATGATCTCGACATTTTGAGAACGGTTTAGTGAAAATATTATCAAGTAAAAGGCCCGTCGTTGTAAGTCTATTTCCTCAAAGTAGCCTACTTTCGTTTTCATAGGATTACATTCGAAAACCACCTGATCA
>TU1451648
TAAACATTAAAGATGCGTTTATTAGCATGAATAAAAGAAACTGACAAATCTGGACAAAGCCAAGCAGCTTTGTTGCAGATGTACAAACAGGACTGATTGGTATAGTAGGACACCAAAGGATGGAAATTAAACAAGTCTGCTAGCCTGAGGCTAGTAGAAAATGTACCAAACTAGGCCGCTAGCTAAATTCTCTCATTTCAAATATCACATGGCATAGAACAATGTCACCCGGGTTATTTCAAACTGTGGTCTAATAGCCTGGCTGGCCAGTCCCAACAATCCTTATAATCCATCTCTTAGTATACCCCTGAAAAATGTCACATTGTTGAGCCTGACTATTCTTTCATTCCTCCACTTTATGCATATCTCAGTACATTGAGGGCTTTTCTTCTCCTTTCGGATTAGTGACTTTTTCCAGGTTCTTGCTGATGATGTCATACAGTTCCGCATAGAAGCCACGGATGTCCAGAAGGATGACTCTGAtgtcagagtaaacagcctcatcCTTCTCATGGACCAGAGAGCGGTAGTCCATCACATGAGTTAACTTGGAAGCTTTAGCCACTGCATCACCCCTCTCTGAAAAGTACTTGTTAATGTTGGTGTGGAAGCCGTCCACTTTGGTCTTCACTGCAGCTATTCTTTCCAAGATTTTCTCCTGGATTGCAACGCCAAAGTCATTCCCATCCTCTATTTTGGGGATGAGATGCTGAATCCAGCAGGACACCTAAGAAGATAAACATCAATGACTGCTACAGTAAATTTAAACCTTCACCAGCCTATATCAGTGTTGCATCTCATTTGACCACAAGAGGTCACTGTTGCTTTATTTTTCGTATTCTTACTGTAATGGCCTCAGTGCTAGGACATCTGTCTAATCTTACTGTAATGGCAGTCTTCCGCAGTGCTAGGATCTCTGTATGATTCTCACTGTAATGGTCTCCCTCAGTGGTAGGATCTCTATAGTTCTTACTGTAATGATTGTCTCCCTCAGTGCTAGGATCTCTGGTTTGACTCTGTCAAGCAGCTTCACAATCTTCTCATTCCCTTTGATGAAGCCACATTTTGGAGCCTTACCCTTCTTCTTATCATCATCATTCTTGTCAGTCTCCATTTCCTGGAGGGAGAATAAATTAGTCAATCTGTAGCCTACCATgtgaaatatacagtgcattcagacccgttcactttctccacattttgttacattacagccttattctaaaacgtattAAATTAAATCATtagtttacacacaataccccataatgacaaaacaaaaacaggtttagatattggcaaatgtataaaaaaaaaaaagaaaacggtaccttatttacttaagtattcagacataagtattcagcacatattgcacttttactttcttctccaacactttgtttttgcatcatttaaaccaaattgaacatgttctattatttatttgagactaaatagattttattgatttattaagTAAAAATGTGTGTTCAATCagcattgttgtaattgtcattattacaaatatatataaaaaatttcCGATTAATCGGCagcggcttttttggtcctccaataaatcggtattggcgttgaaaaatcataatcggtcgacctctaatccagagcatcccaaacaggttcaatgggtgacatgtctgagtatgcaggccatggaagaactgggacattttcagcttccaggaattgtgtacagatccttgcgacatggggctgtgcattaccatgctgaaacatgaggcgatggcgatggatgaatggcacgacaatgggcctcaggaacttgtcacagtatctctgtgcattcaaattgccatcgataaaatgcaattgtgttcgtagcttatgcctaccaataccataaccccaccatggggcactctgttcacaacgttgacatcagcaaacccctCCCCCACACAACATCATatctgtggtctgtggttgtgaggccggttgagcgtactgccaaattctctaaagcaATGTTGaagaggcttatggtagagaaattaacagtctattctctggcaacagctctagtggacattacTGCAGTCAACATGTAATTTGCACActaacttgaaacatctgtggcattgtgttgtgtgacaaaactgcacattttagagcggCCTTGTATTGTCcctggcacaaggtgcaccttgtgtAATGAtagtgctgtttaatcagcttcttgatatgccacacatgtcaggtagatggattatcttgacaaaggagaaatgctcactaacagggatggggggaaaaaatatattttaaaaagtgcACAATTTGAGATAAGCTTTTCAtgcgcatggaacatttctgggatctttatttcagctcatgaaacatgtgaccaacacttgttgcgtttatattttggttcagtgtatatggtatgtgtcccaaatagcacccagttgcctatatagtgcgctacttttgaacCGAGCCCTGTGGGTAGCCcaatgggccctagtcaaaagaaGTTCACTAAAtagtaaatagggtgccatttgggaacagATTTTGTATTTGGTTAGAAGAGCATGATAGCCGGTCACCTCATCCTCTGGAGTAGGAGGGTCTGGTATAGGGATGTCTAGAGGAGCATGGAGAGTGGACAGGTCTGTGATGCTGAGATCCTCCTCCtgggagagaaatggaaaggagagtgggatggaggaagagcaggagtgataaaggagaagaggagtgggagggaagtggagagatagatgagaggaAAGTAGGTAGAGCCGGTTGGACAAGATATGGATGAAAAGGTTGGTTAATTTCACAATGTGGGAACAGACAGTGATACATGGGATGTGAACTAACCAACCTACCTTCAGCAGGTTGTCCAGTTGGGTGATCTTCAATGGGATGTAGTTTGAAAACAGATCCTCTGcctaaaaaaaacagaaataggtAAGAACTAACTACACCATTATGCCACAATGGCATACCCCTTTCTACTTCAAATGGTAATGCAATTGCACCAGCAGACATCTGTTAACATAATAAGGCAAACACATACTAACCTGTTGATACAGAGACTGGCGGAAGTTCTCCACCTAAGGCGAAGGGACAAAAAGAAGATACTGAGGCTGCGTTTCAAACTCATAAAAGACACCCTCTTCCACTTACACTCGCCTTATTCCCTTGGGGAATGCCCGCAGCAATATTTGTCGTTGGTCCAAATTATTAGCCAAGCAAGGGTAGTTTGCAACCTAAGCCCCACAGCCCTCGTTTTTTTAATGgagtttgcgagtgtacaattatgttcacgtCGAGGCCTGAAAcgccccataattcaatttgcgACGATTGTACATCTGCTAAGAAGAGTCCGCCAAAACTTAAAACCTCAATGGCAATATagagtcaacatacaagtgtaagtaaaaacaaaCGTAAATAAGTTATTTTTAAATAGTGCTACTAATACAAAGCACGTCTTATAAaagtaattatgtttttgtttggttgtcttttggaaataaaacattttatttcttcagaagttccagctaggcaggctaacgttagttagctaattaatttcctagctatcatacagtaggcgaATATTATTCAATTATATAGTTAataagtagacatgcaa

Function

symbol description
psme2 Predicted to enable endopeptidase activator activity. Predicted to be involved in positive regulation of endopeptidase activity; regulation of G1/S transition of mitotic cell cycle; and regulation of proteasomal protein catabolic process. Predicted to be part of proteasome activator complex. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human PSME2 (proteasome activator subunit 2).

NR:

description
proteasome activator complex subunit 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1451647 False 1212 lncRNA 0.43 11 23445838 23451494
TU1451648 True 3661 TUCP 0.41 6 23445838 23450473

Neighbor

gene id symbol gene type direction distance location
LOC110489836 lsm5 coding upstream 251 23439842 ~ 23445587 (+)
LOC110510445 LOC106590311 coding upstream 46787 23387536 ~ 23399121 (+)
LOC110489828 LOC106590304 coding upstream 77026 23350408 ~ 23368812 (+)
LOC110489823 LOC106590302 coding upstream 103743 23275513 ~ 23342095 (+)
mastl LOC106590301 coding upstream 192052 23248095 ~ 23253786 (+)
prex2 prex2 coding downstream 6614 23458108 ~ 23658840 (+)
LOC110489839 LOC106590236 coding downstream 215175 23666471 ~ 23836438 (+)
gig2e NA coding downstream 246686 23698180 ~ 23730175 (+)
LOC118938911 NA coding downstream 405919 23857413 ~ 23904392 (+)
sulf1 sulf1 coding downstream 498938 23950432 ~ 24027801 (+)
G1270651 NA non-coding upstream 40524 23403079 ~ 23405314 (+)
G1270647 LOC106590309 non-coding upstream 60776 23384754 ~ 23385062 (+)
G1270640 NA non-coding upstream 70208 23375395 ~ 23375630 (+)
G1270844 NA non-coding downstream 261300 23712794 ~ 23716562 (+)
G1270848 NA non-coding downstream 269595 23721089 ~ 23723367 (+)
G1270849 NA non-coding downstream 269794 23721288 ~ 23723683 (+)
G1270885 NA non-coding downstream 329763 23781257 ~ 23804723 (+)
G1270892 NA non-coding downstream 352531 23804025 ~ 23805261 (+)
G1270652 NA other upstream 37836 23406660 ~ 23408002 (+)
G1270643 NA other upstream 68278 23377308 ~ 23377560 (+)
LOC110489812 rdh12 other upstream 309117 23132828 ~ 23146739 (+)
slc12a7b LOC106590280 other upstream 1651585 21729755 ~ 21794253 (+)
G1267949 pck2 other upstream 2604440 20840295 ~ 20841398 (+)
G1271852 LOC106584099 other downstream 794929 24246423 ~ 24250283 (+)
G1272220 LOC106590226 other downstream 936918 24388412 ~ 24403661 (+)
G1272573 NA other downstream 1290409 24741879 ~ 24787896 (+)
chchd7 chch7 other downstream 1308385 24759852 ~ 24762965 (+)

Expression


Co-expression Network