Gene
RNA
| Item | Value |
|---|---|
| gene id | G1271559 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 23738905 ~ 23739115 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1452602 | True | 211 | lncRNA | 0.42 | 1 | 23738905 | 23739115 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psme2 | psme2 | coding | downstream | 287272 | 23445830 ~ 23451633 (-) |
| LOC110489831 | LOC106590310 | coding | downstream | 297513 | 23399765 ~ 23441392 (-) |
| LOC110489830 | LOC106590309 | coding | downstream | 353055 | 23379779 ~ 23385850 (-) |
| LOC110489829 | LOC106590307 | coding | downstream | 359919 | 23371167 ~ 23378986 (-) |
| LOC110489826 | LOC106590306 | coding | downstream | 388518 | 23342993 ~ 23350387 (-) |
| LOC110489841 | LOC106590235 | coding | upstream | 289683 | 24028798 ~ 24124676 (-) |
| LOC110489842 | LOC106590233 | coding | upstream | 406125 | 24145240 ~ 24175377 (-) |
| gad2 | gad2 | coding | upstream | 512095 | 24251210 ~ 24264911 (-) |
| myo3a | myo3a | coding | upstream | 530776 | 24269891 ~ 24344532 (-) |
| LOC110489847 | LOC106590228 | coding | upstream | 641384 | 24380499 ~ 24385560 (-) |
| G1271557 | NA | non-coding | downstream | 1206 | 23737360 ~ 23737699 (-) |
| G1271556 | NA | non-coding | downstream | 1875 | 23736829 ~ 23737030 (-) |
| G1271376 | NA | non-coding | downstream | 331442 | 23404887 ~ 23407463 (-) |
| G1271370 | NA | non-coding | downstream | 368146 | 23370448 ~ 23370759 (-) |
| G1271299 | NA | non-coding | downstream | 534117 | 23204587 ~ 23204788 (-) |
| G1271585 | NA | non-coding | upstream | 33338 | 23772453 ~ 23774069 (-) |
| G1271612 | NA | non-coding | upstream | 96324 | 23835439 ~ 23836434 (-) |
| G1271957 | NA | non-coding | upstream | 165265 | 23904380 ~ 23904603 (-) |
| G1271986 | NA | non-coding | upstream | 221705 | 23960820 ~ 23961381 (-) |
| G1272012 | NA | non-coding | upstream | 265153 | 24004268 ~ 24004522 (-) |
| G1271421 | NA | other | downstream | 9966 | 23713355 ~ 23728939 (-) |
| G1269265 | NA | other | downstream | 1935553 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 2778816 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 3448232 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 3470417 | 20267966 ~ 20268488 (-) |
| G1274532 | LOC106590196 | other | upstream | 2307133 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 2772410 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 2815853 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 2831163 | 26566351 ~ 26694581 (-) |
| LOC110489892 | NA | other | upstream | 2995098 | 26733490 ~ 26743932 (-) |
