G1271622


Basic Information

Item Value
gene id G1271622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 23843544 ~ 23843798 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1452667
gctacaatgaatgcagcctccggataaatggtttccagtttgcaaagagtcaaataaagttcattcagagccaacgatgtgtctgcttggggggggggatatatacggctgtgattataatcgaagagaattctcttggtagataatgcggtctacatttgattgtgaggaattctaaatcaggtgaacagaaggatttgagttcctgtatgtttctttcatcacaccatgtcacgttagtcataaggcatacgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1452667 True 255 lncRNA 0.41 1 23843544 23843798

Neighbor

gene id symbol gene type direction distance location
LOC110489839 LOC106590236 coding upstream 7106 23666471 ~ 23836438 (+)
gig2e NA coding upstream 113369 23698180 ~ 23730175 (+)
prex2 prex2 coding upstream 184704 23458108 ~ 23658840 (+)
LOC110489836 lsm5 coding upstream 397957 23439842 ~ 23445587 (+)
LOC110510445 LOC106590311 coding upstream 444493 23387536 ~ 23399121 (+)
LOC118938911 NA coding downstream 13615 23857413 ~ 23904392 (+)
sulf1 sulf1 coding downstream 106634 23950432 ~ 24027801 (+)
si:ch211-37e10.2 LOC106590232 coding downstream 342668 24186466 ~ 24192913 (+)
nle1 nle1 coding downstream 369868 24213666 ~ 24229710 (+)
prtfdc1a LOC106590221 coding downstream 760704 24604502 ~ 24618190 (+)
G1271616 NA non-coding upstream 4014 23839310 ~ 23839530 (+)
G1270892 NA non-coding upstream 38283 23804025 ~ 23805261 (+)
G1270885 NA non-coding upstream 38821 23781257 ~ 23804723 (+)
G1270849 NA non-coding upstream 119861 23721288 ~ 23723683 (+)
G1270848 NA non-coding upstream 120177 23721089 ~ 23723367 (+)
G1271715 NA non-coding downstream 120967 23964765 ~ 23989432 (+)
G1271728 NA non-coding downstream 159634 24003432 ~ 24003680 (+)
G1271732 NA non-coding downstream 169536 24013334 ~ 24013911 (+)
G1271733 NA non-coding downstream 174481 24018279 ~ 24018511 (+)
G1271734 NA non-coding downstream 181422 24025220 ~ 24025696 (+)
G1270669 psme2 other upstream 393071 23445838 ~ 23451494 (+)
G1270652 NA other upstream 435542 23406660 ~ 23408002 (+)
G1270643 NA other upstream 465984 23377308 ~ 23377560 (+)
LOC110489812 rdh12 other upstream 706823 23132828 ~ 23146739 (+)
G1271852 LOC106584099 other downstream 402625 24246423 ~ 24250283 (+)
G1272220 LOC106590226 other downstream 544614 24388412 ~ 24403661 (+)
G1272573 NA other downstream 898105 24741879 ~ 24787896 (+)
chchd7 chch7 other downstream 916081 24759852 ~ 24762965 (+)
LOC110489866 tmem241 other downstream 1028054 24869606 ~ 24876724 (+)

Expression


Co-expression Network