Gene
RNA
| Item | Value |
|---|---|
| gene id | G1271715 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 23964765 ~ 23989432 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1452762 | True | 213 | lncRNA | 0.49 | 2 | 23964765 | 23989432 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938911 | NA | coding | upstream | 60373 | 23857413 ~ 23904392 (+) |
| LOC110489839 | LOC106590236 | coding | upstream | 128327 | 23666471 ~ 23836438 (+) |
| gig2e | NA | coding | upstream | 234590 | 23698180 ~ 23730175 (+) |
| prex2 | prex2 | coding | upstream | 305925 | 23458108 ~ 23658840 (+) |
| LOC110489836 | lsm5 | coding | upstream | 519178 | 23439842 ~ 23445587 (+) |
| si:ch211-37e10.2 | LOC106590232 | coding | downstream | 197034 | 24186466 ~ 24192913 (+) |
| nle1 | nle1 | coding | downstream | 224234 | 24213666 ~ 24229710 (+) |
| prtfdc1a | LOC106590221 | coding | downstream | 615070 | 24604502 ~ 24618190 (+) |
| LOC110489855 | arhgap21 | coding | downstream | 636037 | 24625469 ~ 24731493 (+) |
| chchd7 | chch7 | coding | downstream | 770420 | 24759852 ~ 24762965 (+) |
| G1271622 | NA | non-coding | upstream | 120967 | 23843544 ~ 23843798 (+) |
| G1271616 | NA | non-coding | upstream | 125235 | 23839310 ~ 23839530 (+) |
| G1270892 | NA | non-coding | upstream | 159504 | 23804025 ~ 23805261 (+) |
| G1270885 | NA | non-coding | upstream | 160042 | 23781257 ~ 23804723 (+) |
| G1270849 | NA | non-coding | upstream | 241082 | 23721288 ~ 23723683 (+) |
| G1271728 | NA | non-coding | downstream | 14000 | 24003432 ~ 24003680 (+) |
| G1271732 | NA | non-coding | downstream | 23902 | 24013334 ~ 24013911 (+) |
| G1271733 | NA | non-coding | downstream | 28847 | 24018279 ~ 24018511 (+) |
| G1271734 | NA | non-coding | downstream | 35788 | 24025220 ~ 24025696 (+) |
| G1271649 | NA | non-coding | downstream | 38953 | 24028385 ~ 24028709 (+) |
| G1270669 | psme2 | other | upstream | 514292 | 23445838 ~ 23451494 (+) |
| G1270652 | NA | other | upstream | 556763 | 23406660 ~ 23408002 (+) |
| G1270643 | NA | other | upstream | 587205 | 23377308 ~ 23377560 (+) |
| LOC110489812 | rdh12 | other | upstream | 828044 | 23132828 ~ 23146739 (+) |
| G1271852 | LOC106584099 | other | downstream | 256991 | 24246423 ~ 24250283 (+) |
| G1272220 | LOC106590226 | other | downstream | 398980 | 24388412 ~ 24403661 (+) |
| G1272573 | NA | other | downstream | 752471 | 24741879 ~ 24787896 (+) |
| LOC110489866 | tmem241 | other | downstream | 882420 | 24869606 ~ 24876724 (+) |
