Gene
RNA
| Item | Value |
|---|---|
| gene id | G1271728 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 24003432 ~ 24003680 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1452776 | True | 249 | lncRNA | 0.50 | 1 | 24003432 | 24003680 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938911 | NA | coding | upstream | 99040 | 23857413 ~ 23904392 (+) |
| LOC110489839 | LOC106590236 | coding | upstream | 166994 | 23666471 ~ 23836438 (+) |
| gig2e | NA | coding | upstream | 273257 | 23698180 ~ 23730175 (+) |
| prex2 | prex2 | coding | upstream | 344592 | 23458108 ~ 23658840 (+) |
| LOC110489836 | lsm5 | coding | upstream | 557845 | 23439842 ~ 23445587 (+) |
| si:ch211-37e10.2 | LOC106590232 | coding | downstream | 182786 | 24186466 ~ 24192913 (+) |
| nle1 | nle1 | coding | downstream | 209986 | 24213666 ~ 24229710 (+) |
| prtfdc1a | LOC106590221 | coding | downstream | 600822 | 24604502 ~ 24618190 (+) |
| LOC110489855 | arhgap21 | coding | downstream | 621789 | 24625469 ~ 24731493 (+) |
| chchd7 | chch7 | coding | downstream | 756172 | 24759852 ~ 24762965 (+) |
| G1271715 | NA | non-coding | upstream | 14000 | 23964765 ~ 23989432 (+) |
| G1271622 | NA | non-coding | upstream | 159634 | 23843544 ~ 23843798 (+) |
| G1271616 | NA | non-coding | upstream | 163902 | 23839310 ~ 23839530 (+) |
| G1270892 | NA | non-coding | upstream | 198171 | 23804025 ~ 23805261 (+) |
| G1270885 | NA | non-coding | upstream | 198709 | 23781257 ~ 23804723 (+) |
| G1271732 | NA | non-coding | downstream | 9654 | 24013334 ~ 24013911 (+) |
| G1271733 | NA | non-coding | downstream | 14599 | 24018279 ~ 24018511 (+) |
| G1271734 | NA | non-coding | downstream | 21540 | 24025220 ~ 24025696 (+) |
| G1271649 | NA | non-coding | downstream | 24705 | 24028385 ~ 24028709 (+) |
| G1271648 | NA | non-coding | downstream | 25679 | 24029359 ~ 24029528 (+) |
| G1270669 | psme2 | other | upstream | 552959 | 23445838 ~ 23451494 (+) |
| G1270652 | NA | other | upstream | 595430 | 23406660 ~ 23408002 (+) |
| G1270643 | NA | other | upstream | 625872 | 23377308 ~ 23377560 (+) |
| LOC110489812 | rdh12 | other | upstream | 866711 | 23132828 ~ 23146739 (+) |
| G1271852 | LOC106584099 | other | downstream | 242743 | 24246423 ~ 24250283 (+) |
| G1272220 | LOC106590226 | other | downstream | 384732 | 24388412 ~ 24403661 (+) |
| G1272573 | NA | other | downstream | 738223 | 24741879 ~ 24787896 (+) |
| LOC110489866 | tmem241 | other | downstream | 868172 | 24869606 ~ 24876724 (+) |
