G1271649


Basic Information

Item Value
gene id G1271649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 24028385 ~ 24028709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1452694
tgtaaaggtcatttccaaCTGAACGTTTTCCATGAATGAGATCTCCACGAAAGTGGAAACATAACCTTAAAAAGTTGACAAAGGAGGATAGGCTTGAATCCCGGCCTCAGTCATCTCTCGACCAATTATCACAGTGCAGTCCCATCAGAAATATAACCACTGACAAATCAGATGATCACAATAGTTTGACCATAAATGCACTTTGAACATTTATTTAGCTTTTCCCTTGTACTGACCGTTGCCTTTAGTTTAAATGTTTGTGGTTTGGAAACACGTATTCACTGTAACTCCAATGGCATCTCAAAGCTTAACACTGATCATTGGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1452694 True 325 lncRNA 0.39 1 24028385 24028709

Neighbor

gene id symbol gene type direction distance location
sulf1 sulf1 coding upstream 584 23950432 ~ 24027801 (+)
LOC118938911 NA coding upstream 123993 23857413 ~ 23904392 (+)
LOC110489839 LOC106590236 coding upstream 191947 23666471 ~ 23836438 (+)
gig2e NA coding upstream 298210 23698180 ~ 23730175 (+)
prex2 prex2 coding upstream 369545 23458108 ~ 23658840 (+)
si:ch211-37e10.2 LOC106590232 coding downstream 157757 24186466 ~ 24192913 (+)
nle1 nle1 coding downstream 184957 24213666 ~ 24229710 (+)
prtfdc1a LOC106590221 coding downstream 575793 24604502 ~ 24618190 (+)
LOC110489855 arhgap21 coding downstream 596760 24625469 ~ 24731493 (+)
chchd7 chch7 coding downstream 731143 24759852 ~ 24762965 (+)
G1271734 NA non-coding upstream 2689 24025220 ~ 24025696 (+)
G1271733 NA non-coding upstream 9874 24018279 ~ 24018511 (+)
G1271732 NA non-coding upstream 14474 24013334 ~ 24013911 (+)
G1271728 NA non-coding upstream 24705 24003432 ~ 24003680 (+)
G1271715 NA non-coding upstream 38953 23964765 ~ 23989432 (+)
G1271648 NA non-coding downstream 650 24029359 ~ 24029528 (+)
G1271784 NA non-coding downstream 76926 24105635 ~ 24106464 (+)
G1271829 NA non-coding downstream 183710 24212419 ~ 24212672 (+)
G1271837 NA non-coding downstream 193765 24222474 ~ 24223494 (+)
G1270669 psme2 other upstream 577912 23445838 ~ 23451494 (+)
G1270652 NA other upstream 620383 23406660 ~ 23408002 (+)
G1270643 NA other upstream 650825 23377308 ~ 23377560 (+)
LOC110489812 rdh12 other upstream 891664 23132828 ~ 23146739 (+)
G1271852 LOC106584099 other downstream 217714 24246423 ~ 24250283 (+)
G1272220 LOC106590226 other downstream 359703 24388412 ~ 24403661 (+)
G1272573 NA other downstream 713194 24741879 ~ 24787896 (+)
LOC110489866 tmem241 other downstream 843143 24869606 ~ 24876724 (+)

Expression


Co-expression Network