G1271840


Basic Information

Item Value
gene id G1271840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 24231385 ~ 24231679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1452893
tttcatcaactatgaccgacaaaatgagaaaaaaataaataagttacaggtctgagagagccagaaatcttgcttgtttgtaggtgaccaaatacttatttttccaccataatttgcaaatcaattcattaaaaatcctataatgtgattttctggatttttttttctcattttgactaaatacttttttgccccactgtgtatatataaataaagcTGCCCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1452893 True 224 lncRNA 0.30 2 24231385 24231679

Neighbor

gene id symbol gene type direction distance location
nle1 nle1 coding upstream 1675 24213666 ~ 24229710 (+)
si:ch211-37e10.2 LOC106590232 coding upstream 38472 24186466 ~ 24192913 (+)
sulf1 sulf1 coding upstream 203584 23950432 ~ 24027801 (+)
LOC118938911 NA coding upstream 326993 23857413 ~ 23904392 (+)
LOC110489839 LOC106590236 coding upstream 394947 23666471 ~ 23836438 (+)
prtfdc1a LOC106590221 coding downstream 372823 24604502 ~ 24618190 (+)
LOC110489855 arhgap21 coding downstream 393790 24625469 ~ 24731493 (+)
chchd7 chch7 coding downstream 528173 24759852 ~ 24762965 (+)
LOC110489862 fam110b coding downstream 594929 24826608 ~ 24829935 (+)
LOC110489863 sdcbp coding downstream 604928 24836607 ~ 24840963 (+)
G1271837 NA non-coding upstream 7891 24222474 ~ 24223494 (+)
G1271829 NA non-coding upstream 18713 24212419 ~ 24212672 (+)
G1271784 NA non-coding upstream 124921 24105635 ~ 24106464 (+)
G1271648 NA non-coding upstream 201857 24029359 ~ 24029528 (+)
G1271841 NA non-coding downstream 48 24231727 ~ 24231963 (+)
G1271842 NA non-coding downstream 793 24232472 ~ 24232809 (+)
G1271844 NA non-coding downstream 1996 24233675 ~ 24234008 (+)
G1271845 NA non-coding downstream 2462 24234141 ~ 24234404 (+)
G1271846 NA non-coding downstream 2755 24234434 ~ 24234636 (+)
G1270669 psme2 other upstream 780912 23445838 ~ 23451494 (+)
G1270652 NA other upstream 823383 23406660 ~ 23408002 (+)
G1270643 NA other upstream 853825 23377308 ~ 23377560 (+)
LOC110489812 rdh12 other upstream 1094664 23132828 ~ 23146739 (+)
G1271852 LOC106584099 other downstream 14744 24246423 ~ 24250283 (+)
G1272220 LOC106590226 other downstream 156733 24388412 ~ 24403661 (+)
G1272573 NA other downstream 510224 24741879 ~ 24787896 (+)
LOC110489866 tmem241 other downstream 640173 24869606 ~ 24876724 (+)

Expression


Co-expression Network