G1272270


Basic Information

Item Value
gene id G1272270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 24480464 ~ 24480720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1453362
GTatttagctctattctgttttcTCCCCCAGACAAACTCCCTAGTTCTTGCCAttgacaagcatactcataaaagcatacccataacatgatgcagccaccaccatgcttgaaaatatgaagaggggTACTtactcagtgatatgttgtgttggatttgcccaaaacataatgctttgtattcgagatgtaaagtacatttctttgccaagttttttgcagttttacttcagtgccttATTGCACACAGAACATATG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1453362 True 257 lncRNA 0.39 1 24480464 24480720

Neighbor

gene id symbol gene type direction distance location
nle1 nle1 coding upstream 250754 24213666 ~ 24229710 (+)
si:ch211-37e10.2 LOC106590232 coding upstream 287551 24186466 ~ 24192913 (+)
sulf1 sulf1 coding upstream 452663 23950432 ~ 24027801 (+)
LOC118938911 NA coding upstream 576072 23857413 ~ 23904392 (+)
gig2e NA coding upstream 750289 23698180 ~ 23730175 (+)
prtfdc1a LOC106590221 coding downstream 123782 24604502 ~ 24618190 (+)
LOC110489855 arhgap21 coding downstream 144749 24625469 ~ 24731493 (+)
chchd7 chch7 coding downstream 279132 24759852 ~ 24762965 (+)
LOC110489862 fam110b coding downstream 345888 24826608 ~ 24829935 (+)
LOC110489863 sdcbp coding downstream 355887 24836607 ~ 24840963 (+)
G1272220 LOC106590226 non-coding upstream 81496 24388412 ~ 24403661 (+)
G1271870 myo3a non-coding upstream 196948 24282256 ~ 24283516 (+)
G1271859 gad2 non-coding upstream 217620 24260517 ~ 24262844 (+)
G1271752 NA non-coding upstream 244419 24235601 ~ 24236045 (+)
G1271846 NA non-coding upstream 245828 24234434 ~ 24234636 (+)
G1272274 NA non-coding downstream 2621 24483341 ~ 24483716 (+)
G1272278 gpr158 non-coding downstream 11112 24491832 ~ 24492253 (+)
G1272287 NA non-coding downstream 21783 24502503 ~ 24502728 (+)
G1272293 NA non-coding downstream 28547 24509267 ~ 24509492 (+)
G1272294 NA non-coding downstream 30153 24510873 ~ 24511100 (+)
G1271852 LOC106584099 other upstream 230181 24246423 ~ 24250283 (+)
LOC110489839 LOC106590236 other upstream 785283 23666471 ~ 23836438 (+)
G1270669 psme2 other upstream 1029991 23445838 ~ 23451494 (+)
G1270652 NA other upstream 1072462 23406660 ~ 23408002 (+)
G1272573 NA other downstream 261183 24741879 ~ 24787896 (+)
LOC110489866 tmem241 other downstream 391132 24869606 ~ 24876724 (+)
G1272672 LOC106590208 other downstream 479212 24959932 ~ 25027501 (+)
rbis cssa29h8orf59 other downstream 487689 24968304 ~ 24976522 (+)

Expression


Co-expression Network