G1272656


Basic Information

Item Value
gene id G1272656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 24866261 ~ 24866567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1453786
AAGGACTCTCCACGCTTGAAAGTACCAAAGGAGGCAGTCTTGGCTCATCTGAGGAGCCCTAGGTGGTGTTTACCCAAGAAGCCAGAGCAGGCAAAGATCTACTGCCAAGAACTTCAGAAGCTAGAAACTGCAGGCTATGTGATCAAGTTCCCCCAAGAAGAGGTTGACATGGAAGAGGAGTCCTGGTACATCCTGCACCACAATGAAAAGAACAGGCTAGTGTTCAACTGTTTCTCAGCATACAAGGGCCAAGTTCTTAGCAAACTCCTACTACCAGGACCAACCTACCGTCCTTTACCTCCTTGGC

Function

NR:

description
uncharacterized protein LOC101882959

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1453786 True 307 lncRNA 0.49 1 24866261 24866567

Neighbor

gene id symbol gene type direction distance location
LOC110489863 sdcbp coding upstream 25298 24836607 ~ 24840963 (+)
LOC110489862 fam110b coding upstream 36326 24826608 ~ 24829935 (+)
chchd7 chch7 coding upstream 103298 24759852 ~ 24762965 (+)
LOC110489855 arhgap21 coding upstream 134768 24625469 ~ 24731493 (+)
prtfdc1a LOC106590221 coding upstream 248071 24604502 ~ 24618190 (+)
LOC110489866 tmem241 coding downstream 3039 24869606 ~ 24876724 (+)
rbis cssa29h8orf59 coding downstream 101737 24968304 ~ 24976522 (+)
zgc:111976 LOC106590202 coding downstream 786171 25652738 ~ 25662668 (+)
LOC110489875 LOC106590201 coding downstream 799156 25665723 ~ 25703391 (+)
LOC118938912 NA coding downstream 940107 25806674 ~ 25820021 (+)
G1272642 NA non-coding upstream 30091 24835668 ~ 24836170 (+)
G1272573 NA non-coding upstream 78365 24741879 ~ 24787896 (+)
G1272502 NA non-coding upstream 275079 24590898 ~ 24591182 (+)
G1272317 NA non-coding upstream 318290 24547742 ~ 24547971 (+)
G1272304 gpr158 non-coding upstream 341502 24524460 ~ 24524759 (+)
G1272686 NA non-coding downstream 34151 24900718 ~ 24901029 (+)
G1272688 NA non-coding downstream 36141 24902708 ~ 24902992 (+)
G1272694 NA non-coding downstream 44282 24910849 ~ 24911088 (+)
G1272698 NA non-coding downstream 50462 24917029 ~ 24917297 (+)
G1272220 LOC106590226 other upstream 462600 24388412 ~ 24403661 (+)
G1271852 LOC106584099 other upstream 615978 24246423 ~ 24250283 (+)
LOC110489839 LOC106590236 other upstream 1171080 23666471 ~ 23836438 (+)
G1272672 LOC106590208 other downstream 93365 24959932 ~ 25027501 (+)
G1274765 NA other downstream 1497711 26364278 ~ 26365146 (+)
G1274830 NA other downstream 1573444 26440011 ~ 26442387 (+)

Expression


Co-expression Network