G1272851


Basic Information

Item Value
gene id G1272851
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 25156033 ~ 25156923 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1453999
AGGGAGAATGTCTGTTCATCCTCGttgaaacagaaaacaaaaacgCATTGACCCAAGAATCAAAACACTCCTCGTCCACTCAGCACCATCTATGAAAAATGATACTTCCAAAAATACTTGACACTGATATCTGCAAAAGTATAATAAATCGAAAAAATGAAAGAAACACAAAAAGAAACAAACCTGTGATCAGTGAGCTGCAAGAAAAGTTTCAAGTTAAAACGTCATCAGGTTTAAAAATGACTCCTTTAAAGAAAAGAGGACCAAAATAAAAGCAAAGGCTTGGTCAGTGAGCACCGAGACACCAAAATCACAAAACTCGTATAAACAACACTGCAAAATACAAAGCAAAGCATAGCAACAGCAAAAGTCGacagaaacaaaaaaataaaaatgtttgaaaaCCACCAGTAAAACCACATTAGAAAAATATTAGACTGACAACCCGCTTGGTTGAAAAACCAGTTTCATGATTTCACAAGACTGCAAGCACGAATCTCCAGTGCCCGATGCAAACCGTTACCCATCTCGGTACACATGATTCAGAATCACTGCATGCTAAAAACTTGAAGCCTGGATGGAAAAACGCTAAAAACCACCACTTCAAATATCATCTTAAACACCAGCAAAAGGAGGAAAAATAAAAAGAGTAATTAAAAAGACAAAAAATGCTTAGAAAAAGCCATTGGAAATGTACTCACCGAGCGGGAGTAAAATGTTGCAATAAAAATGTGATATGGCACAAAATACAGTATGGCGGTGCAAGCCCGAAATGATGTGCTTTTCTCTAGATCTCAGCCTCCGGTTCTGTCATGTGACTCAGAATCAGCCCGACATCCAGCAATGAGCGACTAGCGAAGAACAGCTGAAGCCGAATACTCTCCGAACGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1453999 True 891 lncRNA 0.39 1 25156033 25156923

Neighbor

gene id symbol gene type direction distance location
rbis cssa29h8orf59 coding upstream 179511 24968304 ~ 24976522 (+)
LOC110489866 tmem241 coding upstream 279309 24869606 ~ 24876724 (+)
LOC110489863 sdcbp coding upstream 315070 24836607 ~ 24840963 (+)
LOC110489862 fam110b coding upstream 326098 24826608 ~ 24829935 (+)
chchd7 chch7 coding upstream 393070 24759852 ~ 24762965 (+)
zgc:111976 LOC106590202 coding downstream 495815 25652738 ~ 25662668 (+)
LOC110489875 LOC106590201 coding downstream 508800 25665723 ~ 25703391 (+)
LOC118938912 NA coding downstream 649751 25806674 ~ 25820021 (+)
LOC118938913 NA coding downstream 694897 25851820 ~ 25853297 (+)
LOC110489881 LOC106590196 coding downstream 778254 25935177 ~ 26048644 (+)
G1272846 NA non-coding upstream 8247 25147556 ~ 25147786 (+)
G1272835 NA non-coding upstream 21334 25134493 ~ 25134699 (+)
G1272819 NA non-coding upstream 42790 25113016 ~ 25113243 (+)
G1272813 NA non-coding upstream 49161 25106560 ~ 25106872 (+)
G1272812 NA non-coding upstream 49992 25105755 ~ 25106041 (+)
G1273235 NA non-coding downstream 20173 25177096 ~ 25177316 (+)
G1273264 NA non-coding downstream 36559 25193482 ~ 25193800 (+)
G1273288 NA non-coding downstream 54284 25211207 ~ 25211509 (+)
G1273297 NA non-coding downstream 60011 25216934 ~ 25217417 (+)
G1273308 NA non-coding downstream 65780 25222703 ~ 25222955 (+)
G1272672 LOC106590208 other upstream 192992 24959932 ~ 25027501 (+)
G1272573 NA other upstream 412228 24741879 ~ 24787896 (+)
G1274765 NA other downstream 1207355 26364278 ~ 26365146 (+)
G1274830 NA other downstream 1283088 26440011 ~ 26442387 (+)
kif9 kif9 other downstream 1803868 26960749 ~ 26974049 (+)
G1275572 NA other downstream 1944386 27101309 ~ 27102027 (+)
G1276288 NA other downstream 2696695 27853618 ~ 27854013 (+)

Expression


Co-expression Network