G1273741


Basic Information

Item Value
gene id G1273741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 25891802 ~ 25892514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1454966
ctttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagcttaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaaacttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttccggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattgttcacaaaaaaatacagtttaaatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1454966 True 713 lncRNA 0.40 1 25891802 25892514

Neighbor

gene id symbol gene type direction distance location
LOC118938913 NA coding upstream 38505 25851820 ~ 25853297 (+)
LOC118938912 NA coding upstream 71781 25806674 ~ 25820021 (+)
LOC110489875 LOC106590201 coding upstream 188411 25665723 ~ 25703391 (+)
zgc:111976 LOC106590202 coding upstream 229134 25652738 ~ 25662668 (+)
rbis cssa29h8orf59 coding upstream 915280 24968304 ~ 24976522 (+)
LOC110489881 LOC106590196 coding downstream 42663 25935177 ~ 26048644 (+)
LOC110489887 LOC106590191 coding downstream 652181 26544695 ~ 26564656 (+)
LOC110489891 LOC106590187 coding downstream 864261 26756775 ~ 26759201 (+)
LOC110489893 LOC106590186 coding downstream 869426 26761940 ~ 26810579 (+)
topbp1 LOC106590185 coding downstream 918508 26811022 ~ 26849032 (+)
G1273735 NA non-coding upstream 8188 25883401 ~ 25883614 (+)
G1273722 NA non-coding upstream 28427 25862955 ~ 25863375 (+)
G1273718 NA non-coding upstream 35181 25856386 ~ 25856621 (+)
G1273671 NA non-coding upstream 105415 25783647 ~ 25786387 (+)
G1273622 NA non-coding upstream 146455 25686844 ~ 25745347 (+)
G1273753 NA non-coding downstream 16832 25909346 ~ 25909545 (+)
G1273808 NA non-coding downstream 79990 25972504 ~ 25972706 (+)
G1273825 NA non-coding downstream 104244 25996758 ~ 25997017 (+)
G1273827 NA non-coding downstream 109568 26002082 ~ 26002327 (+)
G1272672 LOC106590208 other upstream 928761 24959932 ~ 25027501 (+)
LOC110489866 tmem241 other upstream 1015086 24869606 ~ 24876724 (+)
chchd7 chch7 other upstream 1128837 24759852 ~ 24762965 (+)
G1272573 NA other upstream 1147997 24741879 ~ 24787896 (+)
G1274765 NA other downstream 471764 26364278 ~ 26365146 (+)
G1274830 NA other downstream 547497 26440011 ~ 26442387 (+)
kif9 kif9 other downstream 1068277 26960749 ~ 26974049 (+)
G1275572 NA other downstream 1208795 27101309 ~ 27102027 (+)
G1276288 NA other downstream 1961104 27853618 ~ 27854013 (+)

Expression


Co-expression Network