Gene
RNA
| Item | Value |
|---|---|
| gene id | G1274528 |
| gene name | LOC105006661 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 26042370 ~ 26042613 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cadherin-7 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1455792 | True | 244 | lncRNA | 0.59 | 1 | 26042370 | 26042613 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489880 | LOC106590197 | coding | downstream | 241118 | 25786208 ~ 25801252 (-) |
| LOC110489878 | LOC106590198 | coding | downstream | 267429 | 25770924 ~ 25774941 (-) |
| LOC110489879 | LOC106590199 | coding | downstream | 273334 | 25746689 ~ 25769036 (-) |
| LOC110489876 | LOC106590200 | coding | downstream | 305492 | 25717772 ~ 25736878 (-) |
| ralaa | LOC106590204 | coding | downstream | 395855 | 25620868 ~ 25646515 (-) |
| cdh19 | LOC106590195 | coding | upstream | 49719 | 26092332 ~ 26114459 (-) |
| trnaa-ugc-65 | NA | coding | upstream | 82128 | 26124741 ~ 26124814 (-) |
| LOC110489883 | LOC106590194 | coding | upstream | 204529 | 26247142 ~ 26252430 (-) |
| LOC110489884 | tmx3 | coding | upstream | 397382 | 26439995 ~ 26506930 (-) |
| pxdc1b | pxdc1 | coding | upstream | 471066 | 26513679 ~ 26528616 (-) |
| G1274525 | NA | non-coding | downstream | 4298 | 26037807 ~ 26038072 (-) |
| G1274524 | LOC107396935 | non-coding | downstream | 4952 | 26036961 ~ 26037418 (-) |
| G1274509 | NA | non-coding | downstream | 23465 | 26018694 ~ 26018905 (-) |
| G1274499 | NA | non-coding | downstream | 39122 | 26003011 ~ 26003248 (-) |
| G1274497 | LOC106590196 | non-coding | downstream | 40223 | 26001653 ~ 26002147 (-) |
| G1274529 | NA | non-coding | upstream | 236 | 26042849 ~ 26043088 (-) |
| G1274532 | LOC106590196 | non-coding | upstream | 3445 | 26046058 ~ 26048599 (-) |
| G1274548 | NA | non-coding | upstream | 23341 | 26065954 ~ 26066232 (-) |
| G1274561 | NA | non-coding | upstream | 47430 | 26090043 ~ 26090437 (-) |
| G1274568 | NA | non-coding | upstream | 72261 | 26114874 ~ 26115075 (-) |
| G1271421 | NA | other | downstream | 2313431 | 23713355 ~ 23728939 (-) |
| G1269265 | NA | other | downstream | 4239018 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 5082281 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 5751697 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 5773882 | 20267966 ~ 20268488 (-) |
| G1275015 | NA | other | upstream | 468912 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 512355 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 527665 | 26566351 ~ 26694581 (-) |
| LOC110489892 | NA | other | upstream | 691600 | 26733490 ~ 26743932 (-) |
