G1274561



Basic Information


Item Value
gene id G1274561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 26090043 ~ 26090437 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1455834
CAGTGTTTTAATTTAACACTGTTGTGGTGTCCCTATGGGTCCACAGACTCGACACGCTCAATGTTCATTTTGTTTTCTGTTAGTGCTTGAGAATTTTCTGTGTACGTTATAATATACAGGTAAACACTACCTTTCATTACCTTTGTATTGTTCTACGAATTACAAGCTGTGCACTTGTGTTCTGTATTATGAATTTACAACTATAAAACAGCCTTAAACAAATATGGTAGTTTTACTTTGCAAACTTCAATACAGCCTTTAAACGTTTGTTTAAATATCTATTCAGAAATATGAGTATTCACTTCTATTCAGAGGCGTCACCCCTACATTCCTCCCTTGAGAAGGGTGAGATCAAGCTAGTCCCCATCAGAAATGTGAGACATGCACACACGGCA
>TU1455833
CAGTGTTTTAATTTAACACTGTTGTGGTGTCCCTATGGGTCCACAGACTCGACACGCTCAATGTTCATTTTGTTTTCTGTTAGTGCTTGAGAATTTTCTGTGTACGTTATAATATACAGGTAAACACTACCTTTCATTACCTTTGTATTGTTCTACGAATTACAAGCTGTGCACTTGTGTTCTGTATTATGAATTTACAACTATAAAACAGCCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1455834 False 395 lncRNA 0.37 1 26090043 26090437
TU1455833 True 214 lncRNA 0.36 1 26090224 26090437

Neighbor


gene id symbol gene type direction distance location
LOC110489880 LOC106590197 coding downstream 288791 25786208 ~ 25801252 (-)
LOC110489878 LOC106590198 coding downstream 315102 25770924 ~ 25774941 (-)
LOC110489879 LOC106590199 coding downstream 321007 25746689 ~ 25769036 (-)
LOC110489876 LOC106590200 coding downstream 353165 25717772 ~ 25736878 (-)
ralaa LOC106590204 coding downstream 443528 25620868 ~ 25646515 (-)
cdh19 LOC106590195 coding upstream 1895 26092332 ~ 26114459 (-)
trnaa-ugc-65 NA coding upstream 34304 26124741 ~ 26124814 (-)
LOC110489883 LOC106590194 coding upstream 156705 26247142 ~ 26252430 (-)
LOC110489884 tmx3 coding upstream 349558 26439995 ~ 26506930 (-)
pxdc1b pxdc1 coding upstream 423242 26513679 ~ 26528616 (-)
G1274548 NA non-coding downstream 23811 26065954 ~ 26066232 (-)
G1274532 LOC106590196 non-coding downstream 41444 26046058 ~ 26048599 (-)
G1274529 NA non-coding downstream 46955 26042849 ~ 26043088 (-)
G1274528 LOC105006661 non-coding downstream 47430 26042370 ~ 26042613 (-)
G1274525 NA non-coding downstream 51971 26037807 ~ 26038072 (-)
G1274568 NA non-coding upstream 24437 26114874 ~ 26115075 (-)
G1274595 NA non-coding upstream 80733 26171170 ~ 26177357 (-)
G1274596 NA non-coding upstream 82433 26172870 ~ 26179247 (-)
G1274648 NA non-coding upstream 151025 26241462 ~ 26241722 (-)
G1274649 NA non-coding upstream 152114 26242551 ~ 26242767 (-)
G1271421 NA other downstream 2361104 23713355 ~ 23728939 (-)
G1269265 NA other downstream 4286691 21802687 ~ 21803352 (-)
G1268555 LOC106590243 other downstream 5129954 20958372 ~ 20960089 (-)
G1267452 NA other downstream 5799370 20290350 ~ 20290673 (-)
G1275015 NA other upstream 421088 26511525 ~ 26512075 (-)
G1275016 LOC106590191 other upstream 464531 26554968 ~ 26562033 (-)
LOC110489888 gli3 other upstream 479841 26566351 ~ 26694581 (-)
LOC110489892 NA other upstream 643776 26733490 ~ 26743932 (-)
G1275434 LOC106590185 other upstream 746883 26837320 ~ 26841026 (-)

Expression



Co-expression Network