G1274830


Basic Information

Item Value
gene id G1274830
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 26440011 ~ 26442387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1456117
GACAATCTTTATTTCAAACCAGTAATAAAGTGTGACAATCTCAATTCAAACCCAATGAGCAAAGTTTGGCAGAGAATGGTAGGCAACTACAATGACCAGAATGCAAGGCAAGGGCATGTTGGTTTCCATAGTGCAGTTTCACAGTTGTCTTCTGAAAACCAAGATTAGTACTTGGGTTCGGGTGCCTAATTTTGTCAACTAAACGCTAGACACAAGCGCAATAGATGTTTTAGCTGACGTCACGAAAACGATGCGCGCGCTTCAATGGGGCAgtgtgttgtgattctggatggccagatagctagcaacaatgacaagaagctacCACGTGGGGAATCGTAGGTAGCtagtttcatcttgttcttgataccatgtcttgtttttgaGGTGCTTAGACTGAAGtcatgtctatgctaatatggctcaAATTTGCTAGCCAACTAACAACTGTAACGATCTATTTGAGataagtgctcattgtgcaaatgtattgttTTCGATAAACATTGATGACAAAATGTTATATATTTAGTCTCCAATCTAACACAATCTGTTTTGCCCTATAGTTGCGCACGTGTTGGTTTTGTTTCTAAACTATCAAAACTTCTATGAAATCCGCTAAAGAAAAAGTTGAACAGAAACGTAACAATTGTTATGTAATATAATAGTTTCACTGGGTAACTTAACGAGGGCTGGAGATCATGTTTTTCGTAATACTTATATGACCTTGATCTAACATTTCATTAACATCAGTATGCCATGTATCCATAAGATAAACCGTTGTAGTAGTTGATCTGGCATTGTTCATCAACCGTAGGTCAtatcatatacattgtttgtcatGCAATGCTTATGTAGAACTAAGAATATAAACGACAGTGTACCCCTTTAAACGCCACATGACCCTTTTATTGCAATGTACTGTCATTAAGTACTGTAAAAACTCCCAACAGGATTTTGTCAGTGCATTGAGTAAACTCACACTGAATTGTATTGTAATCTCAGTGCATTTGTATGCAATCTGATACCATTTCCTTCCCAGAAACATAGCCTACCAGAACTAGAACTAGTGATGGACAACAGGTGGTGAAGATCTTTTGCAGGAGAGCAAAGAGCCACCATTTTGGATCTGATCAGCCATTGTCTTCAAGTGTATAACCATTCCATgtttgcatctgaaatggcacaaACCCATATTGATGTCATTAAGCCTGTCTCCCATTACATTAACCATTGGCCATCTAAAATAGAGAAAAAACTACTTACTGTACAGTGTGTCTATTTAAAACTACAGCAGGGTAAATAAGCCAGACATCCCTTCAACCTTACATTATCCAGATTGTGGGCTCTATGTGATTGTTTGCATCATTTCCACTGTTGTACACTGTTCTATGAATAAGTGTCTGGAGTTACAAACATGAGATTCCATTTGAAAAGCATGAGTATTCATTTTATGGCAAATTTTCCTTCATGGGCACTTCCTCTGCAGTCGACTATGGGTGAATTGCAACATTCGGGGGGTAGTAGTAATCAAAATCTTTGATTTGGGAATTCTAAATTCCAACAGAACAAAGTGTATAAATCAATATCAAATATTTCAGTGCCATTGAACACAGGAAAAATGGgtcacctttttttttttttacacaaatgcTACCTGATTCAAAGTATGGAATGACCCTGTGTAGTGGTTGTTTAAGAGATGATAATAATACATTTAGCTAAAATGTGGCTTATTTCCTTCCTTTCTTCTCTGCAACACTTATCAATGACTAATCTTTGTAATTCCATTTCCAAAAGGCTAATTTAATAAAGGACATGATTTTTTTAGTGCGTTGCCTAGCGGCTGACCTAACTGACTAATAAGATTCAATAGCAATAAAAAAACAGTCTGCGAAAAGAAAACAGTAGGGCGGGGCGGGGGATGATAAAgatgaaaaatatataaaacaacacATTGTTGATATGTGTCTGAGTTCCATGTATGTCACTAGGCCTGTTTCTCCGCCTCCACTACCCTTGGCATTAATCTGCTTTCTTGTCGTCCGGGTTCTtttcctgctcctcctcttcctcattctctccGTCCTCCTCGGGGCCCTCCAGCTCCCCGGGGGCCTGCCGAGGCTCGTCCTCCTCgtcgtcctcttcctcctcgtcgtCCCTCTTCATGAGCTCCATGTCCTCCTGGCCATCGTCCGACTCGGCTGTGCAGATGCCATAGCACATCAGGCTGATCACGCCCAGTGGCAGACCAAACAGGAAACAGCCCAGCACTGGGGAGCTGCGA

Function

NR:

description
protein disulfide-isomerase TMX3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1456117 True 2290 TUCP 0.40 2 26440011 26442387
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110489881 LOC106590196 coding upstream 391367 25935177 ~ 26048644 (+)
LOC118938913 NA coding upstream 586714 25851820 ~ 25853297 (+)
LOC118938912 NA coding upstream 619990 25806674 ~ 25820021 (+)
LOC110489875 LOC106590201 coding upstream 736620 25665723 ~ 25703391 (+)
zgc:111976 LOC106590202 coding upstream 777343 25652738 ~ 25662668 (+)
LOC110489887 LOC106590191 coding downstream 102308 26544695 ~ 26564656 (+)
LOC110489891 LOC106590187 coding downstream 314388 26756775 ~ 26759201 (+)
LOC110489893 LOC106590186 coding downstream 319553 26761940 ~ 26810579 (+)
topbp1 LOC106590185 coding downstream 368635 26811022 ~ 26849032 (+)
LOC110489896 LOC106590184 coding downstream 417732 26860119 ~ 26918648 (+)
G1274800 NA non-coding upstream 43248 26396564 ~ 26396763 (+)
G1274795 NA non-coding upstream 47519 26392274 ~ 26392492 (+)
G1274787 NA non-coding upstream 54979 26384816 ~ 26385032 (+)
G1274769 NA non-coding upstream 70696 26369002 ~ 26369315 (+)
G1274767 NA non-coding upstream 72765 26366624 ~ 26367246 (+)
G1274855 NA non-coding downstream 21362 26463749 ~ 26464316 (+)
G1274892 NA non-coding downstream 87373 26529760 ~ 26530120 (+)
G1274894 NA non-coding downstream 89057 26531444 ~ 26531670 (+)
G1274899 NA non-coding downstream 94905 26537292 ~ 26537505 (+)
G1274907 gli3 non-coding downstream 123989 26566376 ~ 26568732 (+)
G1274765 NA other upstream 74865 26364278 ~ 26365146 (+)
rbis cssa29h8orf59 other upstream 1465298 24968304 ~ 24976522 (+)
G1272672 LOC106590208 other upstream 1476970 24959932 ~ 25027501 (+)
LOC110489866 tmem241 other upstream 1563295 24869606 ~ 24876724 (+)
chchd7 chch7 other upstream 1677046 24759852 ~ 24762965 (+)
kif9 kif9 other downstream 518404 26960749 ~ 26974049 (+)
G1275572 NA other downstream 658922 27101309 ~ 27102027 (+)
G1276288 NA other downstream 1411231 27853618 ~ 27854013 (+)
G1276733 NA other downstream 1747799 28190186 ~ 28256406 (+)
G1277159 NA other downstream 2131929 28574316 ~ 28624218 (+)

Expression

G1274830 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 10.
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G1274830 Expression in each Bioproject

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G1274830 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G221287 tmx3,LOC102777948 non-coding NC_053133.1 CM020930.1 20168681 ~ 20262155 (-)