Gene
RNA
| Item | Value |
|---|---|
| gene id | G1275154 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 26725805 ~ 26726152 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1456457 | True | 311 | lncRNA | 0.37 | 2 | 26725805 | 26726152 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489887 | LOC106590191 | coding | upstream | 161149 | 26544695 ~ 26564656 (+) |
| LOC110489881 | LOC106590196 | coding | upstream | 677161 | 25935177 ~ 26048644 (+) |
| LOC118938913 | NA | coding | upstream | 872508 | 25851820 ~ 25853297 (+) |
| LOC118938912 | NA | coding | upstream | 905784 | 25806674 ~ 25820021 (+) |
| LOC110489875 | LOC106590201 | coding | upstream | 1022414 | 25665723 ~ 25703391 (+) |
| LOC110489891 | LOC106590187 | coding | downstream | 30623 | 26756775 ~ 26759201 (+) |
| LOC110489893 | LOC106590186 | coding | downstream | 35788 | 26761940 ~ 26810579 (+) |
| topbp1 | LOC106590185 | coding | downstream | 84870 | 26811022 ~ 26849032 (+) |
| LOC110489896 | LOC106590184 | coding | downstream | 133967 | 26860119 ~ 26918648 (+) |
| LOC110489897 | LOC100380682 | coding | downstream | 197742 | 26923894 ~ 26928782 (+) |
| G1275147 | NA | non-coding | upstream | 9979 | 26715481 ~ 26715826 (+) |
| G1274926 | gli3 | non-coding | upstream | 99308 | 26601652 ~ 26626497 (+) |
| G1274907 | gli3 | non-coding | upstream | 157073 | 26566376 ~ 26568732 (+) |
| G1274899 | NA | non-coding | upstream | 188300 | 26537292 ~ 26537505 (+) |
| G1274894 | NA | non-coding | upstream | 194135 | 26531444 ~ 26531670 (+) |
| G1275160 | NA | non-coding | downstream | 4446 | 26730598 ~ 26731062 (+) |
| G1275243 | NA | non-coding | downstream | 185044 | 26911196 ~ 26911423 (+) |
| G1275251 | NA | non-coding | downstream | 197000 | 26923152 ~ 26923447 (+) |
| G1275257 | NA | non-coding | downstream | 208885 | 26935037 ~ 26935277 (+) |
| G1275272 | NA | non-coding | downstream | 249527 | 26975679 ~ 26982457 (+) |
| G1274830 | NA | other | upstream | 283418 | 26440011 ~ 26442387 (+) |
| G1274765 | NA | other | upstream | 360659 | 26364278 ~ 26365146 (+) |
| rbis | cssa29h8orf59 | other | upstream | 1751092 | 24968304 ~ 24976522 (+) |
| G1272672 | LOC106590208 | other | upstream | 1762764 | 24959932 ~ 25027501 (+) |
| LOC110489866 | tmem241 | other | upstream | 1849089 | 24869606 ~ 24876724 (+) |
| kif9 | kif9 | other | downstream | 234639 | 26960749 ~ 26974049 (+) |
| G1275572 | NA | other | downstream | 375157 | 27101309 ~ 27102027 (+) |
| G1276288 | NA | other | downstream | 1127466 | 27853618 ~ 27854013 (+) |
| G1276733 | NA | other | downstream | 1464034 | 28190186 ~ 28256406 (+) |
| G1277159 | NA | other | downstream | 1848164 | 28574316 ~ 28624218 (+) |
