G1275160


Basic Information

Item Value
gene id G1275160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 26730598 ~ 26731062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1456463
gagtagatgtgtccaaacttttgactggtactgtacatacatggTTTCGTTTCACTATGACTATAGATATCTCTCTAAGGCCAGTGAAAAGTTCTATTCACATACGAGATGGTATTGGTACAATAGATTTGAAATGGTgtaatcacaaacacacacagtgtgttaGACCCGACTCACCATATTAACCAGACTCTGCAGCTCCAGACTGAGGGCCTGCAGTTCTTTCCTGGAGGCAGAGATCTCTGCCTTGGAGGTGGTGAGGGCCTCAGAGCTGGTGGCATTGGCAGCCTGGACCTCATCCAACTGCAGGCAGAGAGAGCAGCACGGGGCCATTAGCTACTGTCTCATACACACTTTGATAACATCATTCAGTGTATTCTTTACATGAGCTGCAGGATTCTTGATGTGAGTCACTTTCAGAGTGAAAGATGCATGTAGATGTTTGCGTGAGAGCGGCAGAGTGGG

Function

NR:

description
LOW QUALITY PROTEIN: thread biopolymer filament subunit gamma-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1456463 True 465 lncRNA 0.46 1 26730598 26731062

Neighbor

gene id symbol gene type direction distance location
LOC110489887 LOC106590191 coding upstream 165942 26544695 ~ 26564656 (+)
LOC110489881 LOC106590196 coding upstream 681954 25935177 ~ 26048644 (+)
LOC118938913 NA coding upstream 877301 25851820 ~ 25853297 (+)
LOC118938912 NA coding upstream 910577 25806674 ~ 25820021 (+)
LOC110489875 LOC106590201 coding upstream 1027207 25665723 ~ 25703391 (+)
LOC110489891 LOC106590187 coding downstream 25713 26756775 ~ 26759201 (+)
LOC110489893 LOC106590186 coding downstream 30878 26761940 ~ 26810579 (+)
topbp1 LOC106590185 coding downstream 79960 26811022 ~ 26849032 (+)
LOC110489896 LOC106590184 coding downstream 129057 26860119 ~ 26918648 (+)
LOC110489897 LOC100380682 coding downstream 192832 26923894 ~ 26928782 (+)
G1275154 NA non-coding upstream 4446 26725805 ~ 26726152 (+)
G1275147 NA non-coding upstream 14772 26715481 ~ 26715826 (+)
G1274926 gli3 non-coding upstream 104101 26601652 ~ 26626497 (+)
G1274907 gli3 non-coding upstream 161866 26566376 ~ 26568732 (+)
G1274899 NA non-coding upstream 193093 26537292 ~ 26537505 (+)
G1275243 NA non-coding downstream 180134 26911196 ~ 26911423 (+)
G1275251 NA non-coding downstream 192090 26923152 ~ 26923447 (+)
G1275257 NA non-coding downstream 203975 26935037 ~ 26935277 (+)
G1275272 NA non-coding downstream 244617 26975679 ~ 26982457 (+)
G1275563 LOC106590178 non-coding downstream 348657 27079719 ~ 27090092 (+)
G1274830 NA other upstream 288211 26440011 ~ 26442387 (+)
G1274765 NA other upstream 365452 26364278 ~ 26365146 (+)
rbis cssa29h8orf59 other upstream 1755885 24968304 ~ 24976522 (+)
G1272672 LOC106590208 other upstream 1767557 24959932 ~ 25027501 (+)
LOC110489866 tmem241 other upstream 1853882 24869606 ~ 24876724 (+)
kif9 kif9 other downstream 229729 26960749 ~ 26974049 (+)
G1275572 NA other downstream 370247 27101309 ~ 27102027 (+)
G1276288 NA other downstream 1122556 27853618 ~ 27854013 (+)
G1276733 NA other downstream 1459124 28190186 ~ 28256406 (+)
G1277159 NA other downstream 1843254 28574316 ~ 28624218 (+)

Expression


Co-expression Network