XLOC_031855 (pimr70)


Basic Information

Item Value
gene id XLOC_031855
gene name pimr70
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 9241121 ~ 9242449 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062387
TACAGAATTGTAAAAAAGCTTGGTCAGGGAGGATACGGGACAGTGTTCGAAGCAGTTCGTGTGAGGGACGGTCTTgagGTGGCAATGAAGGTGGTCATGAAGAGCAGTGACATGGATTACCTCAGCATTCCTGGTCATCCTACACCCCTTCCGTTAGAGGTTGCTCTAACCATTCTTGCCAACAATGGTCCGACCGTTCCTCAGATAATCCAGATGCTGGAGTGGCAGGAGCGTCCCGACTCCTACATAATGATCTTGGAGCGTCCCTCACCCTGCGAAGACCTTTTTGATTTCTTGGAGCGGCACTTAGGAACCCTCAGCGAGAACATGACACGGCACATCATGTGGCAGGTAGTGCAGGCTGCCCACATGTGCTGTCAGCGAGGGGTCCTCCATCGGGACATTAAATTAGAAAACCTGCTGATCAACAAGGAAACTTTGGAAGTTAAACTCATCGACTTTGGCTGCGGTGACCTTCTGAAGACCTCAGCATATACAACATTCTGTGGGACTGAAGATTACTGTCCACCTGAATTTAGATCCAGTGGCAGGTACCATGGAAAGGCGGCAACCGTTTGGTCACTGGGGGTTCTCCTGTATGAGCTGCTGTGTGGAGAACCTCCAAAACACAGTGACCTGGACTTGACAGATGAAAGGATTTGGATCAAACCTGGATTGTCAAAAGAGTGCTGCCAACTGGTCCAGTCCTGCCTGCAGAGGAGCCCCAGGAAGAGGATCGCTTTGGGGAAACTCAGCAGCCATCGCTGGTTCAAGGTA

Function

symbol description
pimr70 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-120215-28 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000088058

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062387 True 777 mRNA 0.51 5 9241121 9242449

Neighbor

gene id symbol gene type direction distance location
XLOC_031854 tbx19 coding upstream 20346 9204099 ~ 9220775 (+)
XLOC_031853 sft2d2b coding upstream 39555 9191981 ~ 9201566 (+)
XLOC_031852 si:ch211-207l14.1 coding upstream 53162 9175886 ~ 9187959 (+)
XLOC_031851 NA coding upstream 68015 9163007 ~ 9173106 (+)
XLOC_031850 zgc:64065 coding upstream 79728 9155252 ~ 9161393 (+)
XLOC_031856 kalrnb coding downstream 47353 9289802 ~ 9455966 (+)
XLOC_031857 NA coding downstream 295221 9537670 ~ 9539292 (+)
XLOC_031858 NA coding downstream 408802 9651251 ~ 9666598 (+)
XLOC_031859 tcf23 coding downstream 409254 9651703 ~ 9657694 (+)
XLOC_031860 sumo1 coding downstream 434971 9677420 ~ 9688511 (+)
XLOC_031845 CR954285.2 non-coding upstream 243125 8705149 ~ 8997996 (+)
XLOC_031846 CR954285.1 non-coding upstream 469525 8771476 ~ 8771596 (+)
XLOC_031844 CU571254.1 non-coding upstream 549128 8691408 ~ 8691993 (+)
XLOC_031840 NA non-coding upstream 787479 8450311 ~ 8453642 (+)
XLOC_031867 NA non-coding downstream 769812 10012261 ~ 10013022 (+)
XLOC_031868 NA non-coding downstream 782201 10024650 ~ 10036969 (+)
XLOC_031872 NA non-coding downstream 933408 10175857 ~ 10184750 (+)

Expression


Co-expression Network