G1275434 (LOC106590185)


Basic Information

Item Value
gene id G1275434
gene name LOC106590185
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 26837320 ~ 26841026 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1456762
gaatacttaccgcaagacatttcagctttttgtttttaataaatttataaaaacaattccactttgacattatggggaacTGTGTGTAAGTCAGTGACAAAAAATCTCAATTGaacccattttaaattcaggcggtaacaaaatgtggaaaaagtcaaggggtgggaatactttctgaaggcactataaacTGCCTTTAAAGCAGTCAGACACATATTCCCTTCAACATAATGTCCCTTTATGAGGCAGTTATGTGCTTTAGTTACAGTCCCACCAACCTGAATGAGGTAATCTGCGATGAACTCTGGCTTCAGACATTTGACTCCCTGGGACATGGCTTCTGGCACATCCACCCGGAAGTCTCCTGGCTTCAACCGGCTGAATTCTGCAAACAGGTGCGTGGTTCCCTtgtacagagatggagagggactggggagaacCTTTGCTCCACCAGACTGCAGTAGTCGTCTGAACCCTGACTCTCTGGTCTGGTCGATGTTTAGCATGACGGTCCAACCGCTGAACGCTCCCTCCAGGTTGTTTTGGTCCTGCAGGTTCCTCCTCCAGCGCATGGCAGCCAATGCCAGCCTCTTCTGATGGGAGCTGATGGAGGGTAGGGCATCCAGGATGGAGCTACTGCCCCACTCGTACG

Function

NR:

description
DNA topoisomerase 2-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1456762 True 652 TUCP 0.48 2 26837320 26841026

Neighbor

gene id symbol gene type direction distance location
LOC110489892 NA coding downstream 93388 26733490 ~ 26743932 (-)
LOC110489890 NA coding downstream 104228 26725455 ~ 26733092 (-)
LOC110489889 LOC106590189 coding downstream 113604 26719787 ~ 26723716 (-)
LOC110489888 gli3 coding downstream 142739 26566351 ~ 26694581 (-)
pxdc1b pxdc1 coding downstream 308704 26513679 ~ 26528616 (-)
LOC110489898 LOC106590183 coding upstream 101696 26941314 ~ 26952371 (-)
LOC110489900 LOC106590179 coding upstream 134640 26975666 ~ 27077575 (-)
LOC110489901 LOC106578667 coding upstream 238665 27079691 ~ 27098630 (-)
LOC110489903 LOC106590177 coding upstream 268060 27109086 ~ 27169269 (-)
LOC110489904 LOC100194683 coding upstream 384208 27225234 ~ 27227089 (-)
G1275383 NA non-coding downstream 72181 26764911 ~ 26765139 (-)
G1275380 NA non-coding downstream 75030 26761973 ~ 26762290 (-)
G1275379 NA non-coding downstream 75820 26760714 ~ 26761500 (-)
G1275378 NA non-coding downstream 77016 26760036 ~ 26760304 (-)
G1275376 NA non-coding downstream 81788 26755255 ~ 26755532 (-)
G1275464 NA non-coding upstream 26194 26867220 ~ 26867504 (-)
G1275465 NA non-coding upstream 26683 26867709 ~ 26868069 (-)
G1275480 NA non-coding upstream 40337 26881363 ~ 26881562 (-)
G1275469 NA non-coding upstream 75593 26916619 ~ 26918635 (-)
G1275505 NA non-coding upstream 81751 26922777 ~ 26922993 (-)
G1275016 LOC106590191 other downstream 275287 26554968 ~ 26562033 (-)
G1275015 NA other downstream 325245 26511525 ~ 26512075 (-)
G1274532 LOC106590196 other downstream 788796 26046058 ~ 26048599 (-)
LOC110489905 LOC106590176 other upstream 387854 27228878 ~ 27231497 (-)
G1276566 NA other upstream 1118026 27959052 ~ 27959434 (-)
G1276639 NA other upstream 1249468 28090494 ~ 28090841 (-)
G1276905 NA other upstream 1420514 28261540 ~ 28265755 (-)

Expression


Co-expression Network