G1275251


Basic Information

Item Value
gene id G1275251
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 26923152 ~ 26923447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1456555
tcctgacctgttcaccggacgtgctacctgtcccagacctgctgttttcaactctctagagacagcaggagtggtagagatactcttaatgatcggctatgaaaaaccaactgacatttactcctgaggtgctgacttgctgcaccctcgacaactactgtgattattattatttgaccatgctggccatttatgaacatttgaacatcttggccatgttctgttataatctcagaagaggactggccacccctcatagcctggttcctctctagatttctttctagggtttggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1456555 True 296 lncRNA 0.46 1 26923152 26923447

Neighbor

gene id symbol gene type direction distance location
LOC110489896 LOC106590184 coding upstream 4504 26860119 ~ 26918648 (+)
topbp1 LOC106590185 coding upstream 74120 26811022 ~ 26849032 (+)
LOC110489893 LOC106590186 coding upstream 112573 26761940 ~ 26810579 (+)
LOC110489891 LOC106590187 coding upstream 163951 26756775 ~ 26759201 (+)
LOC110489887 LOC106590191 coding upstream 358496 26544695 ~ 26564656 (+)
LOC110489897 LOC100380682 coding downstream 447 26923894 ~ 26928782 (+)
kif9 kif9 coding downstream 37302 26960749 ~ 26974049 (+)
trnaa-ugc-66 NA coding downstream 170042 27093489 ~ 27093563 (+)
LOC110489907 LOC106590173 coding downstream 409039 27332486 ~ 27350841 (+)
chpf2 LOC106590171 coding downstream 438356 27361803 ~ 27369326 (+)
G1275243 NA non-coding upstream 11729 26911196 ~ 26911423 (+)
G1275160 NA non-coding upstream 192090 26730598 ~ 26731062 (+)
G1275154 NA non-coding upstream 197000 26725805 ~ 26726152 (+)
G1275147 NA non-coding upstream 207326 26715481 ~ 26715826 (+)
G1274926 gli3 non-coding upstream 296655 26601652 ~ 26626497 (+)
G1275257 NA non-coding downstream 11590 26935037 ~ 26935277 (+)
G1275272 NA non-coding downstream 52232 26975679 ~ 26982457 (+)
G1275563 LOC106590178 non-coding downstream 156272 27079719 ~ 27090092 (+)
G1275573 NA non-coding downstream 179390 27102837 ~ 27103117 (+)
G1275576 NA non-coding downstream 181836 27105283 ~ 27105492 (+)
G1274830 NA other upstream 480765 26440011 ~ 26442387 (+)
G1274765 NA other upstream 558006 26364278 ~ 26365146 (+)
rbis cssa29h8orf59 other upstream 1948439 24968304 ~ 24976522 (+)
G1272672 LOC106590208 other upstream 1960111 24959932 ~ 25027501 (+)
LOC110489866 tmem241 other upstream 2046436 24869606 ~ 24876724 (+)
G1275572 NA other downstream 177862 27101309 ~ 27102027 (+)
G1276288 NA other downstream 930171 27853618 ~ 27854013 (+)
G1276733 NA other downstream 1266739 28190186 ~ 28256406 (+)
G1277159 NA other downstream 1650869 28574316 ~ 28624218 (+)

Expression


Co-expression Network