G1275257


Basic Information

Item Value
gene id G1275257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 26935037 ~ 26935277 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1456561
ccctttgttggcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttactggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacagactttcaactccttcccaagattttctatggggttgagatctggagactggccaccataatttgcaaataaattcattaaaaatcctacaatgtga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1456561 True 241 lncRNA 0.43 1 26935037 26935277

Neighbor

gene id symbol gene type direction distance location
LOC110489897 LOC100380682 coding upstream 6255 26923894 ~ 26928782 (+)
LOC110489896 LOC106590184 coding upstream 16389 26860119 ~ 26918648 (+)
topbp1 LOC106590185 coding upstream 86005 26811022 ~ 26849032 (+)
LOC110489893 LOC106590186 coding upstream 124458 26761940 ~ 26810579 (+)
LOC110489891 LOC106590187 coding upstream 175836 26756775 ~ 26759201 (+)
kif9 kif9 coding downstream 25472 26960749 ~ 26974049 (+)
trnaa-ugc-66 NA coding downstream 158212 27093489 ~ 27093563 (+)
LOC110489907 LOC106590173 coding downstream 397209 27332486 ~ 27350841 (+)
chpf2 LOC106590171 coding downstream 426526 27361803 ~ 27369326 (+)
asap1b LOC106590164 coding downstream 517003 27452280 ~ 27519315 (+)
G1275251 NA non-coding upstream 11590 26923152 ~ 26923447 (+)
G1275243 NA non-coding upstream 23614 26911196 ~ 26911423 (+)
G1275160 NA non-coding upstream 203975 26730598 ~ 26731062 (+)
G1275154 NA non-coding upstream 208885 26725805 ~ 26726152 (+)
G1275147 NA non-coding upstream 219211 26715481 ~ 26715826 (+)
G1275272 NA non-coding downstream 40402 26975679 ~ 26982457 (+)
G1275563 LOC106590178 non-coding downstream 144442 27079719 ~ 27090092 (+)
G1275573 NA non-coding downstream 167560 27102837 ~ 27103117 (+)
G1275576 NA non-coding downstream 170006 27105283 ~ 27105492 (+)
G1275637 NA non-coding downstream 254557 27189834 ~ 27195235 (+)
G1274830 NA other upstream 492650 26440011 ~ 26442387 (+)
G1274765 NA other upstream 569891 26364278 ~ 26365146 (+)
rbis cssa29h8orf59 other upstream 1960324 24968304 ~ 24976522 (+)
G1272672 LOC106590208 other upstream 1971996 24959932 ~ 25027501 (+)
LOC110489866 tmem241 other upstream 2058321 24869606 ~ 24876724 (+)
G1275572 NA other downstream 166032 27101309 ~ 27102027 (+)
G1276288 NA other downstream 918341 27853618 ~ 27854013 (+)
G1276733 NA other downstream 1254909 28190186 ~ 28256406 (+)
G1277159 NA other downstream 1639039 28574316 ~ 28624218 (+)

Expression


Co-expression Network