G1275573


Basic Information

Item Value
gene id G1275573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 27102837 ~ 27103117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1456926
gtggtagactgcaatagcatcgaatagtccccgcgatatgcaactgttcagggaagtcaaggaacaatacacgcagtcagtcaggaaagcaaaggccagctttttcaagcagaaatttgcatcctgtagctctaactccaaaaagttctgggacactgtaaaatccatggagaacaagagcacctcctcccagctgcccactgcactgaggctaggtaacacagtcaccaccgataaatccatgataatcgaaaacttcaacaagcatttctcaacggctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1456926 True 281 lncRNA 0.47 1 27102837 27103117

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-66 NA coding upstream 9274 27093489 ~ 27093563 (+)
kif9 kif9 coding upstream 128788 26960749 ~ 26974049 (+)
LOC110489897 LOC100380682 coding upstream 174055 26923894 ~ 26928782 (+)
LOC110489896 LOC106590184 coding upstream 184189 26860119 ~ 26918648 (+)
topbp1 LOC106590185 coding upstream 253805 26811022 ~ 26849032 (+)
LOC110489907 LOC106590173 coding downstream 229369 27332486 ~ 27350841 (+)
chpf2 LOC106590171 coding downstream 258686 27361803 ~ 27369326 (+)
asap1b LOC106590164 coding downstream 349163 27452280 ~ 27519315 (+)
fam49bb LOC106590167 coding downstream 421008 27524125 ~ 27563497 (+)
LOC110489920 LOC106590161 coding downstream 668500 27771617 ~ 27795387 (+)
G1275563 LOC106590178 non-coding upstream 12745 27079719 ~ 27090092 (+)
G1275272 NA non-coding upstream 120380 26975679 ~ 26982457 (+)
G1275257 NA non-coding upstream 167560 26935037 ~ 26935277 (+)
G1275251 NA non-coding upstream 179390 26923152 ~ 26923447 (+)
G1275243 NA non-coding upstream 191414 26911196 ~ 26911423 (+)
G1275576 NA non-coding downstream 2166 27105283 ~ 27105492 (+)
G1275637 NA non-coding downstream 86717 27189834 ~ 27195235 (+)
G1275642 NA non-coding downstream 100870 27203987 ~ 27263740 (+)
G1275629 NA non-coding downstream 103699 27206816 ~ 27231469 (+)
G1275682 NA non-coding downstream 159197 27262314 ~ 27285241 (+)
G1275572 NA other upstream 810 27101309 ~ 27102027 (+)
G1274830 NA other upstream 660450 26440011 ~ 26442387 (+)
G1274765 NA other upstream 737691 26364278 ~ 26365146 (+)
rbis cssa29h8orf59 other upstream 2128124 24968304 ~ 24976522 (+)
G1276288 NA other downstream 750501 27853618 ~ 27854013 (+)
G1276733 NA other downstream 1087069 28190186 ~ 28256406 (+)
G1277159 NA other downstream 1471199 28574316 ~ 28624218 (+)
G1277279 NA other downstream 1712249 28815366 ~ 28815810 (+)
G1279349 NA other downstream 3199916 30303033 ~ 30303419 (+)

Expression


Co-expression Network