G1275576


Basic Information

Item Value
gene id G1275576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 27105283 ~ 27105492 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1456929
agtcacaatcgaggcaaagatgaatggagcaaagtacatagatccttgttgaaaacctgctccagagcgctcaggacctcagactggggccaaggttcaccttccaacagcacaacgaccctaagcacacagccaagacaacgtaggagtggcttcggaacaagtctctgaatgtccttgagtggcccagccagagcccggacttgaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1456929 True 210 lncRNA 0.53 1 27105283 27105492

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-66 NA coding upstream 11720 27093489 ~ 27093563 (+)
kif9 kif9 coding upstream 131234 26960749 ~ 26974049 (+)
LOC110489897 LOC100380682 coding upstream 176501 26923894 ~ 26928782 (+)
LOC110489896 LOC106590184 coding upstream 186635 26860119 ~ 26918648 (+)
topbp1 LOC106590185 coding upstream 256251 26811022 ~ 26849032 (+)
LOC110489907 LOC106590173 coding downstream 226994 27332486 ~ 27350841 (+)
chpf2 LOC106590171 coding downstream 256311 27361803 ~ 27369326 (+)
asap1b LOC106590164 coding downstream 346788 27452280 ~ 27519315 (+)
fam49bb LOC106590167 coding downstream 418633 27524125 ~ 27563497 (+)
LOC110489920 LOC106590161 coding downstream 666125 27771617 ~ 27795387 (+)
G1275573 NA non-coding upstream 2166 27102837 ~ 27103117 (+)
G1275563 LOC106590178 non-coding upstream 15191 27079719 ~ 27090092 (+)
G1275272 NA non-coding upstream 122826 26975679 ~ 26982457 (+)
G1275257 NA non-coding upstream 170006 26935037 ~ 26935277 (+)
G1275251 NA non-coding upstream 181836 26923152 ~ 26923447 (+)
G1275637 NA non-coding downstream 84342 27189834 ~ 27195235 (+)
G1275642 NA non-coding downstream 98495 27203987 ~ 27263740 (+)
G1275629 NA non-coding downstream 101324 27206816 ~ 27231469 (+)
G1275682 NA non-coding downstream 156822 27262314 ~ 27285241 (+)
G1275724 NA non-coding downstream 186346 27291838 ~ 27292098 (+)
G1275572 NA other upstream 3256 27101309 ~ 27102027 (+)
G1274830 NA other upstream 662896 26440011 ~ 26442387 (+)
G1274765 NA other upstream 740137 26364278 ~ 26365146 (+)
rbis cssa29h8orf59 other upstream 2130570 24968304 ~ 24976522 (+)
G1276288 NA other downstream 748126 27853618 ~ 27854013 (+)
G1276733 NA other downstream 1084694 28190186 ~ 28256406 (+)
G1277159 NA other downstream 1468824 28574316 ~ 28624218 (+)
G1277279 NA other downstream 1709874 28815366 ~ 28815810 (+)
G1279349 NA other downstream 3197541 30303033 ~ 30303419 (+)

Expression


Co-expression Network