G1275642


Basic Information

Item Value
gene id G1275642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 27203987 ~ 27263740 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1457002
gcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatatccctgttagtgagcatttcttctttgccaagagaatatgacctgacaggtgtggcatttcaagaagctgattaaacagcacgatcattacacagatgcaccttgtgctggggacaataaaaggcaactctaaaatgtgcagttttgttacacaacacaatgccacagatgtctcaagttgagggaacgtgcaattggtaggctgactgcaggaatgtccatcagagctgttgccagagaatttcatgttaatttctctaccataagccacctccaacgtcgttttagaggatttgtcagtacatccaacaggcctcaccaccgcagaccacgtgtatggtgtgATGTGGGCGAGCGATTTTCTGATCTGAACATTGGTGGCGGTaggattatggtatgggcaggaataagttacagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1457002 True 484 lncRNA 0.46 2 27203987 27263740

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-66 NA coding upstream 110424 27093489 ~ 27093563 (+)
kif9 kif9 coding upstream 229938 26960749 ~ 26974049 (+)
LOC110489897 LOC100380682 coding upstream 275205 26923894 ~ 26928782 (+)
LOC110489896 LOC106590184 coding upstream 285339 26860119 ~ 26918648 (+)
topbp1 LOC106590185 coding upstream 354955 26811022 ~ 26849032 (+)
LOC110489907 LOC106590173 coding downstream 68746 27332486 ~ 27350841 (+)
chpf2 LOC106590171 coding downstream 98063 27361803 ~ 27369326 (+)
asap1b LOC106590164 coding downstream 188540 27452280 ~ 27519315 (+)
fam49bb LOC106590167 coding downstream 260385 27524125 ~ 27563497 (+)
LOC110489920 LOC106590161 coding downstream 507877 27771617 ~ 27795387 (+)
G1275637 NA non-coding upstream 8752 27189834 ~ 27195235 (+)
G1275576 NA non-coding upstream 98495 27105283 ~ 27105492 (+)
G1275573 NA non-coding upstream 100870 27102837 ~ 27103117 (+)
G1275563 LOC106590178 non-coding upstream 113895 27079719 ~ 27090092 (+)
G1275272 NA non-coding upstream 221530 26975679 ~ 26982457 (+)
G1275724 NA non-coding downstream 28098 27291838 ~ 27292098 (+)
G1275732 NA non-coding downstream 34596 27298336 ~ 27298565 (+)
G1275734 NA non-coding downstream 35611 27299351 ~ 27299612 (+)
G1275735 NA non-coding downstream 35941 27299681 ~ 27299899 (+)
G1275741 NA non-coding downstream 44438 27308178 ~ 27308402 (+)
G1275572 NA other upstream 101960 27101309 ~ 27102027 (+)
G1274830 NA other upstream 761600 26440011 ~ 26442387 (+)
G1274765 NA other upstream 838841 26364278 ~ 26365146 (+)
rbis cssa29h8orf59 other upstream 2229274 24968304 ~ 24976522 (+)
G1276288 NA other downstream 589878 27853618 ~ 27854013 (+)
G1276733 NA other downstream 926446 28190186 ~ 28256406 (+)
G1277159 NA other downstream 1310576 28574316 ~ 28624218 (+)
G1277279 NA other downstream 1551626 28815366 ~ 28815810 (+)
G1279349 NA other downstream 3039293 30303033 ~ 30303419 (+)

Expression


Co-expression Network