Gene
RNA
| Item | Value |
|---|---|
| gene id | G1276288 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 27853618 ~ 27854013 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1457707 | True | 396 | TUCP | 0.44 | 1 | 27853618 | 27854013 |
27,851,600
27,852,000
27,852,400
27,852,800
27,853,200
27,853,600
27,854,000
27,854,400
27,854,800
27,855,200
27,855,600
27,856,000
27,856,400
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489920 | LOC106590161 | coding | upstream | 58231 | 27771617 ~ 27795387 (+) |
| fam49bb | LOC106590167 | coding | upstream | 290121 | 27524125 ~ 27563497 (+) |
| asap1b | LOC106590164 | coding | upstream | 334303 | 27452280 ~ 27519315 (+) |
| chpf2 | LOC106590171 | coding | upstream | 484292 | 27361803 ~ 27369326 (+) |
| LOC110489907 | LOC106590173 | coding | upstream | 502777 | 27332486 ~ 27350841 (+) |
| vps41 | vps41 | coding | downstream | 82130 | 27936143 ~ 27951787 (+) |
| LOC110489924 | LOC106590156 | coding | downstream | 99300 | 27953313 ~ 27964057 (+) |
| lypla1 | lypa1 | coding | downstream | 194933 | 28048946 ~ 28051642 (+) |
| LOC110489930 | LOC106590073 | coding | downstream | 321472 | 28175485 ~ 28189640 (+) |
| LOC110489931 | LOC106590150 | coding | downstream | 346599 | 28200612 ~ 28204289 (+) |
| G1276287 | NA | non-coding | upstream | 78 | 27853132 ~ 27853540 (+) |
| G1276274 | NA | non-coding | upstream | 16430 | 27836253 ~ 27837188 (+) |
| G1276259 | NA | non-coding | upstream | 45549 | 27807859 ~ 27808069 (+) |
| G1276246 | NA | non-coding | upstream | 84042 | 27769365 ~ 27769576 (+) |
| G1276244 | NA | non-coding | upstream | 85652 | 27767504 ~ 27767966 (+) |
| G1276317 | NA | non-coding | downstream | 56890 | 27910903 ~ 27911277 (+) |
| G1276471 | NA | non-coding | downstream | 79069 | 27933082 ~ 27933318 (+) |
| G1276479 | NA | non-coding | downstream | 110445 | 27964458 ~ 27966280 (+) |
| G1276489 | NA | non-coding | downstream | 128993 | 27983006 ~ 27983363 (+) |
| G1276494 | NA | non-coding | downstream | 132619 | 27986632 ~ 27987021 (+) |
| G1275572 | NA | other | upstream | 751591 | 27101309 ~ 27102027 (+) |
| kif9 | kif9 | other | upstream | 891392 | 26960749 ~ 26974049 (+) |
| G1274830 | NA | other | upstream | 1411231 | 26440011 ~ 26442387 (+) |
| G1274765 | NA | other | upstream | 1488472 | 26364278 ~ 26365146 (+) |
| rbis | cssa29h8orf59 | other | upstream | 2878905 | 24968304 ~ 24976522 (+) |
| G1276733 | NA | other | downstream | 336173 | 28190186 ~ 28256406 (+) |
| G1277159 | NA | other | downstream | 720303 | 28574316 ~ 28624218 (+) |
| G1277279 | NA | other | downstream | 961353 | 28815366 ~ 28815810 (+) |
| G1279349 | NA | other | downstream | 2449020 | 30303033 ~ 30303419 (+) |
| htr5ab | htr5a | other | downstream | 2541854 | 30395817 ~ 30416375 (+) |
