Gene
RNA
| Item | Value |
|---|---|
| gene id | G1276489 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 27983006 ~ 27983363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1457948 | True | 358 | lncRNA | 0.41 | 1 | 27983006 | 27983363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489924 | LOC106590156 | coding | upstream | 18949 | 27953313 ~ 27964057 (+) |
| vps41 | vps41 | coding | upstream | 31219 | 27936143 ~ 27951787 (+) |
| LOC110489920 | LOC106590161 | coding | upstream | 187619 | 27771617 ~ 27795387 (+) |
| fam49bb | LOC106590167 | coding | upstream | 419509 | 27524125 ~ 27563497 (+) |
| asap1b | LOC106590164 | coding | upstream | 463691 | 27452280 ~ 27519315 (+) |
| lypla1 | lypa1 | coding | downstream | 65583 | 28048946 ~ 28051642 (+) |
| LOC110489930 | LOC106590073 | coding | downstream | 192122 | 28175485 ~ 28189640 (+) |
| LOC110489931 | LOC106590150 | coding | downstream | 217249 | 28200612 ~ 28204289 (+) |
| LOC110489932 | LOC106590150 | coding | downstream | 222354 | 28205717 ~ 28216245 (+) |
| chmp5b | LOC106590149 | coding | downstream | 239215 | 28222578 ~ 28227687 (+) |
| G1276479 | NA | non-coding | upstream | 16726 | 27964458 ~ 27966280 (+) |
| G1276471 | NA | non-coding | upstream | 49688 | 27933082 ~ 27933318 (+) |
| G1276317 | NA | non-coding | upstream | 71729 | 27910903 ~ 27911277 (+) |
| G1276287 | NA | non-coding | upstream | 129466 | 27853132 ~ 27853540 (+) |
| G1276274 | NA | non-coding | upstream | 145818 | 27836253 ~ 27837188 (+) |
| G1276494 | NA | non-coding | downstream | 3269 | 27986632 ~ 27987021 (+) |
| G1276505 | NA | non-coding | downstream | 15946 | 27999309 ~ 27999555 (+) |
| G1276630 | NA | non-coding | downstream | 102962 | 28086325 ~ 28086580 (+) |
| G1276632 | NA | non-coding | downstream | 103684 | 28087047 ~ 28087286 (+) |
| G1276636 | NA | non-coding | downstream | 105054 | 28088417 ~ 28088685 (+) |
| G1276288 | NA | other | upstream | 128993 | 27853618 ~ 27854013 (+) |
| G1275572 | NA | other | upstream | 880979 | 27101309 ~ 27102027 (+) |
| kif9 | kif9 | other | upstream | 1020780 | 26960749 ~ 26974049 (+) |
| G1274830 | NA | other | upstream | 1540619 | 26440011 ~ 26442387 (+) |
| G1274765 | NA | other | upstream | 1617860 | 26364278 ~ 26365146 (+) |
| G1276733 | NA | other | downstream | 206823 | 28190186 ~ 28256406 (+) |
| G1277159 | NA | other | downstream | 590953 | 28574316 ~ 28624218 (+) |
| G1277279 | NA | other | downstream | 832003 | 28815366 ~ 28815810 (+) |
| G1279349 | NA | other | downstream | 2319670 | 30303033 ~ 30303419 (+) |
| htr5ab | htr5a | other | downstream | 2412504 | 30395817 ~ 30416375 (+) |
