Gene
RNA
| Item | Value |
|---|---|
| gene id | G1276632 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28087047 ~ 28087286 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1458096 | True | 240 | lncRNA | 0.54 | 1 | 28087047 | 28087286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lypla1 | lypa1 | coding | upstream | 35405 | 28048946 ~ 28051642 (+) |
| LOC110489924 | LOC106590156 | coding | upstream | 122990 | 27953313 ~ 27964057 (+) |
| vps41 | vps41 | coding | upstream | 135260 | 27936143 ~ 27951787 (+) |
| LOC110489920 | LOC106590161 | coding | upstream | 291660 | 27771617 ~ 27795387 (+) |
| fam49bb | LOC106590167 | coding | upstream | 523550 | 27524125 ~ 27563497 (+) |
| LOC110489930 | LOC106590073 | coding | downstream | 88199 | 28175485 ~ 28189640 (+) |
| LOC110489931 | LOC106590150 | coding | downstream | 113326 | 28200612 ~ 28204289 (+) |
| LOC110489932 | LOC106590150 | coding | downstream | 118431 | 28205717 ~ 28216245 (+) |
| chmp5b | LOC106590149 | coding | downstream | 135292 | 28222578 ~ 28227687 (+) |
| myom1b | LOC106590144 | coding | downstream | 159232 | 28246518 ~ 28281728 (+) |
| G1276630 | NA | non-coding | upstream | 467 | 28086325 ~ 28086580 (+) |
| G1276505 | NA | non-coding | upstream | 87492 | 27999309 ~ 27999555 (+) |
| G1276494 | NA | non-coding | upstream | 100026 | 27986632 ~ 27987021 (+) |
| G1276489 | NA | non-coding | upstream | 103684 | 27983006 ~ 27983363 (+) |
| G1276479 | NA | non-coding | upstream | 120767 | 27964458 ~ 27966280 (+) |
| G1276636 | NA | non-coding | downstream | 1131 | 28088417 ~ 28088685 (+) |
| G1276640 | NA | non-coding | downstream | 4144 | 28091430 ~ 28091756 (+) |
| G1276655 | NA | non-coding | downstream | 14200 | 28101486 ~ 28101693 (+) |
| G1276658 | NA | non-coding | downstream | 16034 | 28103320 ~ 28103612 (+) |
| G1276682 | NA | non-coding | downstream | 147121 | 28234407 ~ 28236826 (+) |
| G1276288 | NA | other | upstream | 233034 | 27853618 ~ 27854013 (+) |
| G1275572 | NA | other | upstream | 985020 | 27101309 ~ 27102027 (+) |
| kif9 | kif9 | other | upstream | 1124821 | 26960749 ~ 26974049 (+) |
| G1274830 | NA | other | upstream | 1644660 | 26440011 ~ 26442387 (+) |
| G1274765 | NA | other | upstream | 1721901 | 26364278 ~ 26365146 (+) |
| G1276733 | NA | other | downstream | 102900 | 28190186 ~ 28256406 (+) |
| G1277159 | NA | other | downstream | 487030 | 28574316 ~ 28624218 (+) |
| G1277279 | NA | other | downstream | 728080 | 28815366 ~ 28815810 (+) |
| G1279349 | NA | other | downstream | 2215747 | 30303033 ~ 30303419 (+) |
| htr5ab | htr5a | other | downstream | 2308581 | 30395817 ~ 30416375 (+) |
