G1276640


Basic Information

Item Value
gene id G1276640
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28091430 ~ 28091756 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458104
gtctataacaagtggcaacagtgagagacttatttctgtagggatttgtttttaaaatgagaagtttgggcatagacctggaaagtatgacagaactttgcaggctatctctgcagtagattgcaactcctccccctttggcagttctatcttgacggaaaatgttgtagttggggatggaaatctcagaattcttggtggccttcctaagccaggttTCAGACACGGCAAGGGCATCAGGGTTGGCAAGTAAAACAAACATAGGatggaggcttctgatgttaacatgcatgaaaccaaggcttttacggttacagaagtcaacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458104 True 327 lncRNA 0.43 1 28091430 28091756

Neighbor

gene id symbol gene type direction distance location
lypla1 lypa1 coding upstream 39788 28048946 ~ 28051642 (+)
LOC110489924 LOC106590156 coding upstream 127373 27953313 ~ 27964057 (+)
vps41 vps41 coding upstream 139643 27936143 ~ 27951787 (+)
LOC110489920 LOC106590161 coding upstream 296043 27771617 ~ 27795387 (+)
fam49bb LOC106590167 coding upstream 527933 27524125 ~ 27563497 (+)
LOC110489930 LOC106590073 coding downstream 83729 28175485 ~ 28189640 (+)
LOC110489931 LOC106590150 coding downstream 108856 28200612 ~ 28204289 (+)
LOC110489932 LOC106590150 coding downstream 113961 28205717 ~ 28216245 (+)
chmp5b LOC106590149 coding downstream 130822 28222578 ~ 28227687 (+)
myom1b LOC106590144 coding downstream 154762 28246518 ~ 28281728 (+)
G1276636 NA non-coding upstream 2745 28088417 ~ 28088685 (+)
G1276632 NA non-coding upstream 4144 28087047 ~ 28087286 (+)
G1276630 NA non-coding upstream 4850 28086325 ~ 28086580 (+)
G1276505 NA non-coding upstream 91875 27999309 ~ 27999555 (+)
G1276494 NA non-coding upstream 104409 27986632 ~ 27987021 (+)
G1276655 NA non-coding downstream 9730 28101486 ~ 28101693 (+)
G1276658 NA non-coding downstream 11564 28103320 ~ 28103612 (+)
G1276682 NA non-coding downstream 142651 28234407 ~ 28236826 (+)
G1276771 NA non-coding downstream 187374 28279130 ~ 28279583 (+)
G1276776 NA non-coding downstream 227451 28319207 ~ 28319579 (+)
G1276288 NA other upstream 237417 27853618 ~ 27854013 (+)
G1275572 NA other upstream 989403 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1129204 26960749 ~ 26974049 (+)
G1274830 NA other upstream 1649043 26440011 ~ 26442387 (+)
G1274765 NA other upstream 1726284 26364278 ~ 26365146 (+)
G1276733 NA other downstream 98430 28190186 ~ 28256406 (+)
G1277159 NA other downstream 482560 28574316 ~ 28624218 (+)
G1277279 NA other downstream 723610 28815366 ~ 28815810 (+)
G1279349 NA other downstream 2211277 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 2304111 30395817 ~ 30416375 (+)

Expression


Co-expression Network