G1276658


Basic Information

Item Value
gene id G1276658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28103320 ~ 28103612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458122
ggctagagatgagtcagtatgttggcagcagccactcaatgttagtgatggctgtttaacagtctgatggccttgagatagaagctgtttttaagtctctcggtccccgctttgacgCACCTGTgctgacttcgccttctggatcatagcggggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttagtGCGATAGGGATTgcgtcatctgtagatctgttggggcggtgtgcgatttggagtgggtctagggtttctggggtgatggtgttgatgtgagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458122 True 293 lncRNA 0.52 1 28103320 28103612

Neighbor

gene id symbol gene type direction distance location
lypla1 lypa1 coding upstream 51678 28048946 ~ 28051642 (+)
LOC110489924 LOC106590156 coding upstream 139263 27953313 ~ 27964057 (+)
vps41 vps41 coding upstream 151533 27936143 ~ 27951787 (+)
LOC110489920 LOC106590161 coding upstream 307933 27771617 ~ 27795387 (+)
fam49bb LOC106590167 coding upstream 539823 27524125 ~ 27563497 (+)
LOC110489930 LOC106590073 coding downstream 71873 28175485 ~ 28189640 (+)
LOC110489931 LOC106590150 coding downstream 97000 28200612 ~ 28204289 (+)
LOC110489932 LOC106590150 coding downstream 102105 28205717 ~ 28216245 (+)
chmp5b LOC106590149 coding downstream 118966 28222578 ~ 28227687 (+)
myom1b LOC106590144 coding downstream 142906 28246518 ~ 28281728 (+)
G1276655 NA non-coding upstream 1627 28101486 ~ 28101693 (+)
G1276640 NA non-coding upstream 11564 28091430 ~ 28091756 (+)
G1276636 NA non-coding upstream 14635 28088417 ~ 28088685 (+)
G1276632 NA non-coding upstream 16034 28087047 ~ 28087286 (+)
G1276630 NA non-coding upstream 16740 28086325 ~ 28086580 (+)
G1276682 NA non-coding downstream 130795 28234407 ~ 28236826 (+)
G1276771 NA non-coding downstream 175518 28279130 ~ 28279583 (+)
G1276776 NA non-coding downstream 215595 28319207 ~ 28319579 (+)
G1276777 NA non-coding downstream 216355 28319967 ~ 28320341 (+)
G1276778 NA non-coding downstream 216796 28320408 ~ 28320958 (+)
G1276288 NA other upstream 249307 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1001293 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1141094 26960749 ~ 26974049 (+)
G1274830 NA other upstream 1660933 26440011 ~ 26442387 (+)
G1274765 NA other upstream 1738174 26364278 ~ 26365146 (+)
G1276733 NA other downstream 86574 28190186 ~ 28256406 (+)
G1277159 NA other downstream 470704 28574316 ~ 28624218 (+)
G1277279 NA other downstream 711754 28815366 ~ 28815810 (+)
G1279349 NA other downstream 2199421 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 2292255 30395817 ~ 30416375 (+)

Expression


Co-expression Network