G1276733


Basic Information

Item Value
gene id G1276733
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28190186 ~ 28256406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458201
TCAGGGACATAGAAAGTACTGGGTGTTAGACATTTTGCCTTGTAATATACTccctggccagtttattaggtacatcaCCACGTTCATAGaaatggatcgctcctacagacagtgagccACGTGGCCaaggcttgctatataaagcaggcagacaggcatcgaggcattcagttactaatcgattgaacgttagaatgggcaaaacaagtgacctaagcaactttgagcgtggtatgatcgtcggtgccaggcgctCCAGATCAAGTATTTCAGAAAtggcacgacagtgtctaggagaatagtgcgacaaacaaaaaacatccagtcagcggcagtcctgcgGTTGATAACAGCTCGTTCATGAGAGAGGTCGAAGGAAAATGGCAAGAATTGTCTAAGCTGACAGGCGGGAGCCataaacagacaaataacggtgcagtacaacagtggtgtgcagaactcGTCGATCTTTGTCACGGAGGGGCTGTTGCTATCACGTTTGCAGTTGACGGCCACACTGGGTttcactcctatcagctaaaaacaagaagaagggTCTCCAGTGGGaacatgatcaccaacactggacatttgaggagtggaaaaacattgcctggtccgatgAATCtcagttcctgttgcgtcataGTGATGGCAGCCAGGATTTGGCGTAAACAGCATGAGCCCATTTTGCCTGGTGTCAACGATACAGGCTGGTaacggtggtgtaatggtgtggggaatgttttcctggcacacgttatgTCCCTTGATTCCAATTAAGAAACGCTTGAACGCCACAACGTATCTGAACATTGTTGCTGACCAAACCCAATAGAGTATCTTTGGGTGAGATGGAACGGGCTGTTTGAAGCATGATTGTACCGCCATCCAAACTGCAGCAAATGCGTGAtgcagcatggaccaacatccctgtggaacatttccaacaccttgtagactccatggcccaaataattcaggctgttctgttGGCAAAGGGAGGTCCGACCTGGTACTAGATGTGTGTACCTAATAAAGCGGCCGGTGAGTGTAGCTGCTGATGAAAATTCACTACAAAAAAATTGTTATGCTTAGAGTTTTATTTGCTATATTCTATAAATTAATGTAGTTGTCTACTTATTTACATATCTTATTGACTATATTTTTGGTCcatttttgtttttaatgtaTCTATTTATCTTACTGTATTTATCTtgtatgcatcccaaatagcaccctattccttatatattgCATATGTAAtccatggaccctggtcaaaagtagtgcactatatggggaagaGGGTGGCACTTTTTTTTGTGATGCAAGTTTgtcattctgtatgttttgccgAAGCAGCAGCAATTCTTCCTGGGTTCCacacaaaaacataaaacacgacAAGTAACAAAAGCACTGAAACACTGATGGACAATAacagtcacacaaatgtaaaatatgatatacaacaacaaaaacatatatatatatatatata

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458201 True 1504 TUCP 0.43 2 28190186 28256406

Neighbor

gene id symbol gene type direction distance location
LOC110489930 LOC106590073 coding upstream 546 28175485 ~ 28189640 (+)
lypla1 lypa1 coding upstream 138544 28048946 ~ 28051642 (+)
LOC110489924 LOC106590156 coding upstream 226129 27953313 ~ 27964057 (+)
vps41 vps41 coding upstream 238399 27936143 ~ 27951787 (+)
LOC110489920 LOC106590161 coding upstream 394799 27771617 ~ 27795387 (+)
LOC110489939 LOC106590143 coding downstream 25466 28281872 ~ 28316370 (+)
mettl4 mettl4 coding downstream 121398 28377804 ~ 28389529 (+)
LOC110489944 LOC106590138 coding downstream 324217 28580623 ~ 28612037 (+)
LOC100136716 LOC106590136 coding downstream 381341 28637747 ~ 28698956 (+)
LOC110490831 LOC106590071 coding downstream 474670 28731076 ~ 28741476 (+)
G1276658 NA non-coding upstream 86574 28103320 ~ 28103612 (+)
G1276655 NA non-coding upstream 88493 28101486 ~ 28101693 (+)
G1276640 NA non-coding upstream 98430 28091430 ~ 28091756 (+)
G1276636 NA non-coding upstream 101501 28088417 ~ 28088685 (+)
G1276632 NA non-coding upstream 102900 28087047 ~ 28087286 (+)
G1276771 NA non-coding downstream 22724 28279130 ~ 28279583 (+)
G1276776 NA non-coding downstream 62801 28319207 ~ 28319579 (+)
G1276777 NA non-coding downstream 63561 28319967 ~ 28320341 (+)
G1276778 NA non-coding downstream 64002 28320408 ~ 28320958 (+)
G1276779 NA non-coding downstream 64574 28320980 ~ 28321879 (+)
G1276288 NA other upstream 336173 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1088159 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1227960 26960749 ~ 26974049 (+)
G1274830 NA other upstream 1747799 26440011 ~ 26442387 (+)
G1274765 NA other upstream 1825040 26364278 ~ 26365146 (+)
G1277159 NA other downstream 317910 28574316 ~ 28624218 (+)
G1277279 NA other downstream 558960 28815366 ~ 28815810 (+)
G1279349 NA other downstream 2046627 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 2139461 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2687765 30944171 ~ 30947330 (+)

Expression


Co-expression Network