Gene
RNA
| Item | Value |
|---|---|
| gene id | G1276871 |
| gene name | LOC106590150 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28203589 ~ 28210464 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1458345 | False | 500 | lncRNA | 0.46 | 2 | 28203589 | 28210004 |
| TU1458348 | True | 960 | lncRNA | 0.39 | 2 | 28203589 | 28210464 |
28,195,000
28,196,000
28,197,000
28,198,000
28,199,000
28,200,000
28,201,000
28,202,000
28,203,000
28,204,000
28,205,000
28,206,000
28,207,000
28,208,000
28,209,000
28,210,000
28,211,000
28,212,000
28,213,000
NC_048579.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489929 | LOC106590152 | coding | downstream | 143006 | 28051643 ~ 28060583 (-) |
| LOC110489927 | LOC106590151 | coding | downstream | 154662 | 28044204 ~ 28048927 (-) |
| sox32 | LOC106590076 | coding | downstream | 166648 | 28035666 ~ 28036941 (-) |
| LOC110489926 | LOC106590153 | coding | downstream | 198023 | 28003157 ~ 28005566 (-) |
| LOC110489925 | LOC106590155 | coding | downstream | 224855 | 27967449 ~ 27978734 (-) |
| fastkd3 | LOC106590147 | coding | upstream | 16821 | 28227285 ~ 28231675 (-) |
| myl12.1 | LOC106590146 | coding | upstream | 21669 | 28232133 ~ 28236882 (-) |
| trnal-uag-3 | NA | coding | upstream | 98270 | 28308734 ~ 28308811 (-) |
| emilin2b | LOC106590142 | coding | upstream | 106423 | 28316887 ~ 28335821 (-) |
| smchd1 | smchd1 | coding | upstream | 127183 | 28337647 ~ 28377476 (-) |
| G1276666 | NA | non-coding | downstream | 95900 | 28107357 ~ 28107689 (-) |
| G1276645 | NA | non-coding | downstream | 109047 | 28094271 ~ 28094542 (-) |
| G1276633 | NA | non-coding | downstream | 116313 | 28087046 ~ 28087276 (-) |
| G1276574 | NA | non-coding | downstream | 215226 | 27988139 ~ 27988363 (-) |
| G1276569 | NA | non-coding | downstream | 236610 | 27966772 ~ 27966979 (-) |
| G1276896 | NA | non-coding | upstream | 36099 | 28246563 ~ 28247772 (-) |
| G1276887 | LOC106590144 | non-coding | upstream | 69163 | 28279627 ~ 28281816 (-) |
| G1276912 | NA | non-coding | upstream | 82196 | 28292660 ~ 28294131 (-) |
| G1276947 | NA | non-coding | upstream | 182047 | 28392511 ~ 28392785 (-) |
| G1276948 | NA | non-coding | upstream | 183208 | 28393672 ~ 28393997 (-) |
| G1276639 | NA | other | downstream | 112748 | 28090494 ~ 28090841 (-) |
| G1276566 | NA | other | downstream | 244155 | 27959052 ~ 27959434 (-) |
| LOC110489905 | LOC106590176 | other | downstream | 972110 | 27228878 ~ 27231497 (-) |
| LOC110489898 | LOC106590183 | other | downstream | 1259425 | 26941314 ~ 26952371 (-) |
| G1275434 | LOC106590185 | other | downstream | 1362563 | 26837320 ~ 26841026 (-) |
| G1276905 | NA | other | upstream | 51076 | 28261540 ~ 28265755 (-) |
| adcyap1a | paca | other | upstream | 348847 | 28559194 ~ 28565541 (-) |
| LOC110489947 | LOC106590135 | other | upstream | 490738 | 28701177 ~ 28724125 (-) |
| G1278860 | NA | other | upstream | 1420561 | 29631025 ~ 29631768 (-) |
| dlgap1b | LOC106590111 | other | upstream | 1768711 | 29979175 ~ 30253803 (-) |
