G1276682


Basic Information

Item Value
gene id G1276682
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28234407 ~ 28236826 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458148
CCATTGAAGGGGGAGCTTAACAGCCTAATAAACACTCAAGAGATACCCGAGCACCATACTTCAAATCGGATTGAGTTAGAGGTAATTTCGGTCAGCTCTGAATAACCGGTACCACGAATGTGGCTCACCTTTCAGCCAGGTATATTTCTATGGCAATGAATCCTTCACAACTAACCTGCTCCGAAGCAGGCTAACTCACAGCTAACTCCATTTCTCCTGAATCAAGTGTCTGAGTCAAAAGTTGGAGGACCAATGACATCAGATACCCTCCCGCTCATTAAGACTGTCATCATCCTTCATTTAAGGAAGACTAATGATTGAATATTTCATCAAATGTCATAAGACAGCCATCATAGAGtatttgctttccaaactatgTCACAACAGCATTTTGCAAAAGGGAAACTGACAGCCGAAATCAACCAGACTGCAGTTCCCAGTCAAGTCAAGACTGGCAGCCAGTGTACTCACGAGTTTAACAGTAAAATTGCCGGGGTTAGAGGTTTCAAAACACATCTCTGGATCATGTTTATGGCCACAACGCAACAAGACTGCATTTTTAAAACCCCATTTCATaccatagcctgctgaatttgAGAACCTTTTTTAAATTTAGAGCAACAGTTTGGCGTTCAACTAGCATGCTAGAGTTAACGACAGGCGAACGAGCAATATCCAGTCGTAGTACGTATGAAGCCCGACCTGGAATATGAAGCAGCCTAGCTTTATAAAAGCCTGAATAGATCTAGCTTGCGTCATAGTATACCACTCTGGAAATCATTCAGTGCCTCTGTTTCAAATTGAGTGAATTAAACAAAGTCCAAGAGAAAACAGGCTGATTTCAGATCAGCAGAAGGGGGTTTCAGGGACAAGCTAAGATACCCACCCAGTGAGGCTAGCATGTCATGCAGATCCTCCTTGTCGACAAACCCATCACGGTTCTGGTCAATCATGTTGAAGGCCTCCTTGAACTCCTGGATCTGAGACTGGTCAAACATAGCGAACACATTGCTAGTAGCACGCTGGGGGCGCTTCTTGGTGGTCTTTCCCTTTGCCCTTTTGCTCGACATTTTGGCTGTTGTGTTTCTACCTGATTCCCGAAAAGCTGGATAGTCAGTTAGCCCGTGCTGCCCTCTCACAACCAC

Function

NR:

description
myosin regulatory light polypeptide 9-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458148 True 1145 lncRNA 0.44 2 28234407 28236826

Neighbor

gene id symbol gene type direction distance location
chmp5b LOC106590149 coding upstream 6720 28222578 ~ 28227687 (+)
LOC110489932 LOC106590150 coding upstream 18162 28205717 ~ 28216245 (+)
LOC110489931 LOC106590150 coding upstream 30118 28200612 ~ 28204289 (+)
LOC110489930 LOC106590073 coding upstream 44767 28175485 ~ 28189640 (+)
lypla1 lypa1 coding upstream 182765 28048946 ~ 28051642 (+)
myom1b LOC106590144 coding downstream 9692 28246518 ~ 28281728 (+)
LOC110489939 LOC106590143 coding downstream 45046 28281872 ~ 28316370 (+)
mettl4 mettl4 coding downstream 140978 28377804 ~ 28389529 (+)
LOC110489944 LOC106590138 coding downstream 343797 28580623 ~ 28612037 (+)
LOC100136716 LOC106590136 coding downstream 400921 28637747 ~ 28698956 (+)
G1276658 NA non-coding upstream 130795 28103320 ~ 28103612 (+)
G1276655 NA non-coding upstream 132714 28101486 ~ 28101693 (+)
G1276640 NA non-coding upstream 142651 28091430 ~ 28091756 (+)
G1276636 NA non-coding upstream 145722 28088417 ~ 28088685 (+)
G1276632 NA non-coding upstream 147121 28087047 ~ 28087286 (+)
G1276771 NA non-coding downstream 42304 28279130 ~ 28279583 (+)
G1276776 NA non-coding downstream 82381 28319207 ~ 28319579 (+)
G1276777 NA non-coding downstream 83141 28319967 ~ 28320341 (+)
G1276778 NA non-coding downstream 83582 28320408 ~ 28320958 (+)
G1276779 NA non-coding downstream 84154 28320980 ~ 28321879 (+)
G1276288 NA other upstream 380394 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1132380 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1272181 26960749 ~ 26974049 (+)
G1274830 NA other upstream 1792020 26440011 ~ 26442387 (+)
G1274765 NA other upstream 1869261 26364278 ~ 26365146 (+)
G1277159 NA other downstream 337490 28574316 ~ 28624218 (+)
G1277279 NA other downstream 578540 28815366 ~ 28815810 (+)
G1279349 NA other downstream 2066207 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 2159041 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2707345 30944171 ~ 30947330 (+)

Expression


Co-expression Network