Gene
RNA
| Item | Value |
|---|---|
| gene id | G1276896 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28246563 ~ 28247772 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| M-protein, striated muscle-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1458385 | True | 545 | lncRNA | 0.55 | 2 | 28246563 | 28247772 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| myl12.1 | LOC106590146 | coding | downstream | 9681 | 28232133 ~ 28236882 (-) |
| fastkd3 | LOC106590147 | coding | downstream | 14888 | 28227285 ~ 28231675 (-) |
| LOC110489929 | LOC106590152 | coding | downstream | 185980 | 28051643 ~ 28060583 (-) |
| LOC110489927 | LOC106590151 | coding | downstream | 197636 | 28044204 ~ 28048927 (-) |
| sox32 | LOC106590076 | coding | downstream | 209622 | 28035666 ~ 28036941 (-) |
| trnal-uag-3 | NA | coding | upstream | 60962 | 28308734 ~ 28308811 (-) |
| emilin2b | LOC106590142 | coding | upstream | 69115 | 28316887 ~ 28335821 (-) |
| smchd1 | smchd1 | coding | upstream | 89875 | 28337647 ~ 28377476 (-) |
| adcyap1a | paca | coding | upstream | 311422 | 28559194 ~ 28565541 (-) |
| tyms | tyms | coding | upstream | 368695 | 28616467 ~ 28619751 (-) |
| G1276872 | LOC106590148 | non-coding | downstream | 32535 | 28200633 ~ 28214028 (-) |
| G1276871 | LOC106590150 | non-coding | downstream | 36099 | 28203589 ~ 28210464 (-) |
| G1276666 | NA | non-coding | downstream | 138874 | 28107357 ~ 28107689 (-) |
| G1276645 | NA | non-coding | downstream | 152021 | 28094271 ~ 28094542 (-) |
| G1276633 | NA | non-coding | downstream | 159287 | 28087046 ~ 28087276 (-) |
| G1276887 | LOC106590144 | non-coding | upstream | 31855 | 28279627 ~ 28281816 (-) |
| G1276912 | NA | non-coding | upstream | 44888 | 28292660 ~ 28294131 (-) |
| G1276947 | NA | non-coding | upstream | 144739 | 28392511 ~ 28392785 (-) |
| G1276948 | NA | non-coding | upstream | 145900 | 28393672 ~ 28393997 (-) |
| G1276949 | NA | non-coding | upstream | 146420 | 28394192 ~ 28394507 (-) |
| G1276639 | NA | other | downstream | 155722 | 28090494 ~ 28090841 (-) |
| G1276566 | NA | other | downstream | 287129 | 27959052 ~ 27959434 (-) |
| LOC110489905 | LOC106590176 | other | downstream | 1015084 | 27228878 ~ 27231497 (-) |
| LOC110489898 | LOC106590183 | other | downstream | 1302399 | 26941314 ~ 26952371 (-) |
| G1275434 | LOC106590185 | other | downstream | 1405537 | 26837320 ~ 26841026 (-) |
| G1276905 | NA | other | upstream | 13768 | 28261540 ~ 28265755 (-) |
| LOC110489947 | LOC106590135 | other | upstream | 453430 | 28701177 ~ 28724125 (-) |
| G1278860 | NA | other | upstream | 1383253 | 29631025 ~ 29631768 (-) |
| dlgap1b | LOC106590111 | other | upstream | 1731403 | 29979175 ~ 30253803 (-) |
