G1276777


Basic Information

Item Value
gene id G1276777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28319967 ~ 28320341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458246
aaaataaaaaagtgtttATTAGGACAGATACAGTAACTCTTGTCCATAACTGACTGGAATACTACTGCTTTAATCTGAAGAGACCTCTAAATATCTTACCTGTTAAAGTTAAGTATGGTTTGTGTAATGACGGTCTCAGGGGAATGTGGGCAACTGTTGAAAGAGGTTCATTTTCAGAAGACTCACAATTTTATATTCAtagtaaattaaatcaaatgagTCAAAATATCACTTACCAGAAATAACTGGCATATTAGGCTTTAAAGACCCTTTAGAGGGTGGGGAAGCTGTAAAATAATCAAGATACATTTCATGAGGTTTTGAAAGAAGGTCATTCATCTTGCAAacatacactacctttcaaaagtttggggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458246 True 375 lncRNA 0.34 1 28319967 28320341

Neighbor

gene id symbol gene type direction distance location
LOC110489939 LOC106590143 coding upstream 3597 28281872 ~ 28316370 (+)
myom1b LOC106590144 coding upstream 38239 28246518 ~ 28281728 (+)
chmp5b LOC106590149 coding upstream 92280 28222578 ~ 28227687 (+)
LOC110489932 LOC106590150 coding upstream 103722 28205717 ~ 28216245 (+)
LOC110489931 LOC106590150 coding upstream 115678 28200612 ~ 28204289 (+)
mettl4 mettl4 coding downstream 57463 28377804 ~ 28389529 (+)
LOC110489944 LOC106590138 coding downstream 260282 28580623 ~ 28612037 (+)
LOC100136716 LOC106590136 coding downstream 317406 28637747 ~ 28698956 (+)
LOC110490831 LOC106590071 coding downstream 410735 28731076 ~ 28741476 (+)
LOC110489948 mrc1 coding downstream 436447 28756788 ~ 28777089 (+)
G1276776 NA non-coding upstream 388 28319207 ~ 28319579 (+)
G1276771 NA non-coding upstream 40384 28279130 ~ 28279583 (+)
G1276682 NA non-coding upstream 83141 28234407 ~ 28236826 (+)
G1276658 NA non-coding upstream 216355 28103320 ~ 28103612 (+)
G1276655 NA non-coding upstream 218274 28101486 ~ 28101693 (+)
G1276778 NA non-coding downstream 67 28320408 ~ 28320958 (+)
G1276779 NA non-coding downstream 639 28320980 ~ 28321879 (+)
G1276786 NA non-coding downstream 14517 28334858 ~ 28335882 (+)
G1276800 NA non-coding downstream 65005 28385346 ~ 28386056 (+)
G1276733 NA other upstream 63561 28190186 ~ 28256406 (+)
G1276288 NA other upstream 465954 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1217940 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1357741 26960749 ~ 26974049 (+)
G1274830 NA other upstream 1877580 26440011 ~ 26442387 (+)
G1277159 NA other downstream 253975 28574316 ~ 28624218 (+)
G1277279 NA other downstream 495025 28815366 ~ 28815810 (+)
G1279349 NA other downstream 1982692 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 2075526 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2623830 30944171 ~ 30947330 (+)

Expression


Co-expression Network