G1276786


Basic Information

Item Value
gene id G1276786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28334858 ~ 28335882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458255
CTCCAATAATATAACCATACATTATCAGTCAAAACTATAGACAAATGTCtgattatacatacagtacaaacaACTATGAAAACTTCACTCACTTATTCCTCTGTCGTTGTTCTGAGCCAGAGTATGCGCTTCCCTGGAACATGTTATACCGTGACGGCGTTCCATTGATCAATGGAAAGGTGAGCAATAAGGGAAATAAGGCACTTTTTAAGACGAATCCGGTGGGAAGGCACTTCATTTTAATACAACGGAAAAAAGTAGACAAATATTAAACATGTAAGCATTGAGGTTAGACGTTTTGGTCCCTCTCCTAGCAGCAACTCGAAAGGCTGATAATACAAACTTTCTTCCAGGGTATAGCAGCCTGTGACGTGACGTTCGGGGTACAGCGAACCCCCTTCACCAGTGCTCCTCACTCCCAGAGAGTAAAATGCGCTCCCAGTAGAACAGTGATTAAATCCCGTTTCGTAGTTTCCTCACTCATCTGCTTCAGTTTGTATCGGAGATCATGTTCCCTGCTTTCTTGAAAAATACTTGAATGTGGTTGACTGCATGCATGCAACTCTAGTGACGAAGTCCCCAAAGGAACGCTTTCATATCCAGCCCACTGGATAATGCAATACAGTGCTTTACACCAGGTTTTCCCAAACTCGGTTCTGGACCCCCCGCTTTGCAAACATGTGAGAGTGTCAGACTAGCATCACTTTATTGTAAGTGATACATCTTGTAGCAAACATGTTTTATTGATATGCGGGTGTCATATGACCATCACCTTCAGATCGGCGGGGACACTGACTAAAGTACTACTCATATAAAACTTCGAACAAAACCTAAAGACACTTTTTAGAATATGCCAAATGATTGAGTGTGCATTGAAATGAGATCATAGTGTTATAGATACATTTGATTGAGTGTCATTTTAGACGTAAATTTAACCGAATAAAAAACGAGTTGGCGCACACCCAGAAAACATATTTTATGTGTCGGTGCGAACAGCAAAACATCTATAAACTAAAGAAATAGTC

Function

NR:

description
EMILIN-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458255 True 1025 lncRNA 0.41 1 28334858 28335882

Neighbor

gene id symbol gene type direction distance location
LOC110489939 LOC106590143 coding upstream 18488 28281872 ~ 28316370 (+)
myom1b LOC106590144 coding upstream 53130 28246518 ~ 28281728 (+)
chmp5b LOC106590149 coding upstream 107171 28222578 ~ 28227687 (+)
LOC110489932 LOC106590150 coding upstream 118613 28205717 ~ 28216245 (+)
LOC110489931 LOC106590150 coding upstream 130569 28200612 ~ 28204289 (+)
mettl4 mettl4 coding downstream 41922 28377804 ~ 28389529 (+)
LOC110489944 LOC106590138 coding downstream 244741 28580623 ~ 28612037 (+)
LOC100136716 LOC106590136 coding downstream 301865 28637747 ~ 28698956 (+)
LOC110490831 LOC106590071 coding downstream 395194 28731076 ~ 28741476 (+)
LOC110489948 mrc1 coding downstream 420906 28756788 ~ 28777089 (+)
G1276779 NA non-coding upstream 12979 28320980 ~ 28321879 (+)
G1276778 NA non-coding upstream 13900 28320408 ~ 28320958 (+)
G1276777 NA non-coding upstream 14517 28319967 ~ 28320341 (+)
G1276776 NA non-coding upstream 15279 28319207 ~ 28319579 (+)
G1276771 NA non-coding upstream 55275 28279130 ~ 28279583 (+)
G1276800 NA non-coding downstream 49464 28385346 ~ 28386056 (+)
G1276965 NA non-coding downstream 70292 28406174 ~ 28406477 (+)
G1276996 NA non-coding downstream 99057 28434939 ~ 28435199 (+)
G1277000 NA non-coding downstream 100865 28436747 ~ 28436964 (+)
G1276733 NA other upstream 78452 28190186 ~ 28256406 (+)
G1276288 NA other upstream 480845 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1232831 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1372632 26960749 ~ 26974049 (+)
G1274830 NA other upstream 1892471 26440011 ~ 26442387 (+)
G1277159 NA other downstream 238434 28574316 ~ 28624218 (+)
G1277279 NA other downstream 479484 28815366 ~ 28815810 (+)
G1279349 NA other downstream 1967151 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 2059985 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2608289 30944171 ~ 30947330 (+)

Expression


Co-expression Network