Gene
RNA
| Item | Value |
|---|---|
| gene id | G1276800 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28385346 ~ 28386056 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1458270 | True | 684 | lncRNA | 0.45 | 2 | 28385346 | 28386056 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489939 | LOC106590143 | coding | upstream | 68976 | 28281872 ~ 28316370 (+) |
| myom1b | LOC106590144 | coding | upstream | 103618 | 28246518 ~ 28281728 (+) |
| chmp5b | LOC106590149 | coding | upstream | 157659 | 28222578 ~ 28227687 (+) |
| LOC110489932 | LOC106590150 | coding | upstream | 169101 | 28205717 ~ 28216245 (+) |
| LOC110489931 | LOC106590150 | coding | upstream | 181057 | 28200612 ~ 28204289 (+) |
| LOC110489944 | LOC106590138 | coding | downstream | 194567 | 28580623 ~ 28612037 (+) |
| LOC100136716 | LOC106590136 | coding | downstream | 251691 | 28637747 ~ 28698956 (+) |
| LOC110490831 | LOC106590071 | coding | downstream | 345020 | 28731076 ~ 28741476 (+) |
| LOC110489948 | mrc1 | coding | downstream | 370732 | 28756788 ~ 28777089 (+) |
| LOC110489949 | mrc1 | coding | downstream | 409024 | 28795080 ~ 28812062 (+) |
| G1276786 | NA | non-coding | upstream | 49464 | 28334858 ~ 28335882 (+) |
| G1276779 | NA | non-coding | upstream | 63467 | 28320980 ~ 28321879 (+) |
| G1276778 | NA | non-coding | upstream | 64388 | 28320408 ~ 28320958 (+) |
| G1276777 | NA | non-coding | upstream | 65005 | 28319967 ~ 28320341 (+) |
| G1276776 | NA | non-coding | upstream | 65767 | 28319207 ~ 28319579 (+) |
| mettl4 | mettl4 | non-coding | downstream | 435 | 28377804 ~ 28389529 (+) |
| G1276965 | NA | non-coding | downstream | 20118 | 28406174 ~ 28406477 (+) |
| G1276996 | NA | non-coding | downstream | 48883 | 28434939 ~ 28435199 (+) |
| G1277000 | NA | non-coding | downstream | 50691 | 28436747 ~ 28436964 (+) |
| G1277136 | NA | non-coding | downstream | 150222 | 28536278 ~ 28536542 (+) |
| G1276733 | NA | other | upstream | 128940 | 28190186 ~ 28256406 (+) |
| G1276288 | NA | other | upstream | 531333 | 27853618 ~ 27854013 (+) |
| G1275572 | NA | other | upstream | 1283319 | 27101309 ~ 27102027 (+) |
| kif9 | kif9 | other | upstream | 1423120 | 26960749 ~ 26974049 (+) |
| G1274830 | NA | other | upstream | 1942959 | 26440011 ~ 26442387 (+) |
| G1277159 | NA | other | downstream | 188260 | 28574316 ~ 28624218 (+) |
| G1277279 | NA | other | downstream | 429310 | 28815366 ~ 28815810 (+) |
| G1279349 | NA | other | downstream | 1916977 | 30303033 ~ 30303419 (+) |
| htr5ab | htr5a | other | downstream | 2009811 | 30395817 ~ 30416375 (+) |
| G1279833 | NA | other | downstream | 2558115 | 30944171 ~ 30947330 (+) |
