XLOC_031867


Basic Information

Item Value
gene id XLOC_031867
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 10012261 ~ 10013022 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064814
GACAGATTAAAGAAGGTGGTTAACTGACTTCAGCTTTAACGTTAATTTTCATATAAACAAGTTTGTTCACTTCGTacttcagcatgttttatgctttagaagagtcaaaaatgtacttacagcacttttaaaataattatattgggTGGTTTACagctgtacaatggcaaaggttGGTTGATTTTAATCAGCAGTTCAAATGAAGTCTAATAAAGTACTTCAATCCATTTAAAGTGCCTCAAGCGGCTCTGGTGGGTGGATTAGCGCCTTCAGCTGGACAGGACTAAAACTACATTCTATTATCGAGCTGGAAAAAACCAAGATACAATTGTTAAAACAACTCTGACTGAAAGGACTTCATATACACAAAAGACGCCTTGAAGGTAAGTAAATAATGGGATAATGTTCATTTTGGGGCGAGCTAACCTCTCAAATTACATACCAAacgtgtttatttaatttttttgtatgatGTGGTGGTGTTGGACAACAGGATTGGATGTGTAGAGCCACGTAGGGTTTCTTTACAAAGGAACAGCTCCACTTGcccattttaagacatttttttacgttatttttatgtattagtCCAATAGTATGAGTGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064814 True 605 lncRNA 0.36 2 10012261 10013022

Neighbor

gene id symbol gene type direction distance location
XLOC_031866 abi2b coding upstream 1913 9970733 ~ 10010348 (+)
XLOC_031865 cyp20a1 coding upstream 42803 9952678 ~ 9969458 (+)
XLOC_031864 tmem237b coding upstream 95727 9898683 ~ 9916534 (+)
XLOC_031863 pimr74 coding upstream 117372 9893554 ~ 9894889 (+)
XLOC_031862 mpp4l coding upstream 125439 9867426 ~ 9886822 (+)
XLOC_031868 NA coding downstream 11628 10024650 ~ 10036969 (+)
XLOC_031869 sucla2 coding downstream 24230 10037252 ~ 10056640 (+)
XLOC_031870 htr2ab coding downstream 64734 10077756 ~ 10088463 (+)
XLOC_031871 atp7b coding downstream 81039 10094061 ~ 10132102 (+)
XLOC_031872 NA coding downstream 162835 10175857 ~ 10184750 (+)
XLOC_031858 NA non-coding upstream 345663 9651251 ~ 9666598 (+)
XLOC_031857 NA non-coding upstream 472969 9537670 ~ 9539292 (+)
XLOC_031851 NA non-coding upstream 839155 9163007 ~ 9173106 (+)
XLOC_031845 CR954285.2 non-coding upstream 1014265 8705149 ~ 8997996 (+)
XLOC_031874 NA non-coding downstream 364001 10377023 ~ 10398536 (+)
XLOC_031875 NA non-coding downstream 418729 10431751 ~ 10432077 (+)
XLOC_031877 BX005368.1 non-coding downstream 523310 10536332 ~ 10536695 (+)
XLOC_031846 CR954285.1 non-coding upstream 1240665 8771476 ~ 8771596 (+)

Expression


Co-expression Network