G1277145


Basic Information

Item Value
gene id G1277145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28544680 ~ 28544985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458644
ctatttacacactttcaatatttgtaagaccctcagtcctctattaaatcaaatgtatttatatagcccttcgtacatcagctaatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcagatgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttctggctatgcggggtggagattataacagaacatggccgagattttcaaacgttcatagatgacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458644 True 306 lncRNA 0.43 1 28544680 28544985

Neighbor

gene id symbol gene type direction distance location
mettl4 mettl4 coding upstream 155151 28377804 ~ 28389529 (+)
LOC110489939 LOC106590143 coding upstream 228310 28281872 ~ 28316370 (+)
myom1b LOC106590144 coding upstream 262952 28246518 ~ 28281728 (+)
chmp5b LOC106590149 coding upstream 316993 28222578 ~ 28227687 (+)
LOC110489932 LOC106590150 coding upstream 328435 28205717 ~ 28216245 (+)
LOC110489944 LOC106590138 coding downstream 35638 28580623 ~ 28612037 (+)
LOC100136716 LOC106590136 coding downstream 92762 28637747 ~ 28698956 (+)
LOC110490831 LOC106590071 coding downstream 186091 28731076 ~ 28741476 (+)
LOC110489948 mrc1 coding downstream 211803 28756788 ~ 28777089 (+)
LOC110489949 mrc1 coding downstream 250095 28795080 ~ 28812062 (+)
G1277144 NA non-coding upstream 58 28544338 ~ 28544622 (+)
G1277136 NA non-coding upstream 8138 28536278 ~ 28536542 (+)
G1277000 NA non-coding upstream 107716 28436747 ~ 28436964 (+)
G1276996 NA non-coding upstream 109481 28434939 ~ 28435199 (+)
G1276965 NA non-coding upstream 138203 28406174 ~ 28406477 (+)
G1277128 NA non-coding downstream 69417 28614402 ~ 28616681 (+)
G1277174 clul1 non-coding downstream 74984 28619969 ~ 28620709 (+)
G1277177 NA non-coding downstream 80520 28625505 ~ 28626332 (+)
G1277178 clul1 non-coding downstream 81602 28626587 ~ 28631165 (+)
G1277186 NA non-coding downstream 156218 28701203 ~ 28703108 (+)
G1276733 NA other upstream 288274 28190186 ~ 28256406 (+)
G1276288 NA other upstream 690667 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1442653 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1582454 26960749 ~ 26974049 (+)
G1274830 NA other upstream 2102293 26440011 ~ 26442387 (+)
G1277159 NA other downstream 29331 28574316 ~ 28624218 (+)
G1277279 NA other downstream 270381 28815366 ~ 28815810 (+)
G1279349 NA other downstream 1758048 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1850882 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2399186 30944171 ~ 30947330 (+)

Expression


Co-expression Network