G1277128


Basic Information

Item Value
gene id G1277128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28614402 ~ 28616681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458627
attttttttttttaaaggcaACAGGTAGACTGTACCTGAATATTTAAATCAATTAAAAAGGACAACCCCCCATATATTAGTTAATTGAAGCCCATTTAAACTGCCATCTGCATTTTGATGGTGGGGTGGGGATTGTAGTCAACAATCTCAAAGTCTTCTGCACGGAAGTCATCTATTTTCTCAACCGTCCGGAGGAGCTTCAGCTTGGGGAAGGGCCGAATCTCTCTC

Function

NR:

description
thymidylate synthase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458627 True 228 lncRNA 0.41 2 28614402 28616681

Neighbor

gene id symbol gene type direction distance location
LOC110489944 LOC106590138 coding upstream 2365 28580623 ~ 28612037 (+)
mettl4 mettl4 coding upstream 224873 28377804 ~ 28389529 (+)
LOC110489939 LOC106590143 coding upstream 298032 28281872 ~ 28316370 (+)
myom1b LOC106590144 coding upstream 332674 28246518 ~ 28281728 (+)
chmp5b LOC106590149 coding upstream 386715 28222578 ~ 28227687 (+)
LOC100136716 LOC106590136 coding downstream 21066 28637747 ~ 28698956 (+)
LOC110490831 LOC106590071 coding downstream 114395 28731076 ~ 28741476 (+)
LOC110489948 mrc1 coding downstream 140107 28756788 ~ 28777089 (+)
LOC110489949 mrc1 coding downstream 178399 28795080 ~ 28812062 (+)
LOC110489950 LOC106590132 coding downstream 209899 28826580 ~ 28837296 (+)
G1277145 NA non-coding upstream 69417 28544680 ~ 28544985 (+)
G1277144 NA non-coding upstream 69780 28544338 ~ 28544622 (+)
G1277136 NA non-coding upstream 77860 28536278 ~ 28536542 (+)
G1277000 NA non-coding upstream 177438 28436747 ~ 28436964 (+)
G1276996 NA non-coding upstream 179203 28434939 ~ 28435199 (+)
G1277174 clul1 non-coding downstream 3288 28619969 ~ 28620709 (+)
G1277177 NA non-coding downstream 8824 28625505 ~ 28626332 (+)
G1277178 clul1 non-coding downstream 9906 28626587 ~ 28631165 (+)
G1277186 NA non-coding downstream 84522 28701203 ~ 28703108 (+)
G1277276 NA non-coding downstream 195494 28812175 ~ 28812749 (+)
G1276733 NA other upstream 357996 28190186 ~ 28256406 (+)
G1276288 NA other upstream 760389 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1512375 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1652176 26960749 ~ 26974049 (+)
G1274830 NA other upstream 2172015 26440011 ~ 26442387 (+)
G1277279 NA other downstream 198685 28815366 ~ 28815810 (+)
G1279349 NA other downstream 1686352 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1779186 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2327490 30944171 ~ 30947330 (+)
G1281462 NA other downstream 3379486 31996167 ~ 31996513 (+)

Expression


Co-expression Network