G1277276


Basic Information

Item Value
gene id G1277276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28812175 ~ 28812749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458794
CAGTAATTGAGGTACACTTAAACACAGCTATCATCACTATGAGGCAGATTAAAGAGGTTattgggtcgttccaccaattcggtgACTTTTAAGAAGTGGGTACATGGTCCCCCCAAAAAACTCATTAAGAGTACATGATCAACTtcctaaaaaacatgttttcccatttcacgaggtaaataaataaaaaattactacggtttgaccataacagggttgacgattttcatcttaaatcagccataaaacCCCTTGTGACAAGAGTAATCCAAGCTAACAATTCTAGGGAGAGAGAACATTATTGTAATGTTACCCGTAATGTCCAGTTTTCCGTTACTTAGGGGGACATTCTATATATAGTGTCTTctggaagtattcacaccccttacagCCTGATTTTGTGTcacatacttattttccaccataatttgcaaataaattcatagaaaatcctacaatgtgattttctggattttttccccctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458794 True 575 lncRNA 0.37 1 28812175 28812749

Neighbor

gene id symbol gene type direction distance location
LOC110489949 mrc1 coding upstream 113 28795080 ~ 28812062 (+)
LOC110489948 mrc1 coding upstream 35086 28756788 ~ 28777089 (+)
LOC110490831 LOC106590071 coding upstream 70699 28731076 ~ 28741476 (+)
LOC100136716 LOC106590136 coding upstream 113219 28637747 ~ 28698956 (+)
LOC110489944 LOC106590138 coding upstream 200138 28580623 ~ 28612037 (+)
LOC110489950 LOC106590132 coding downstream 13831 28826580 ~ 28837296 (+)
cacnb2a cacb2 coding downstream 38412 28851161 ~ 28963361 (+)
arl8 LOC106590131 coding downstream 170730 28983479 ~ 28996322 (+)
malrd1 malrd1 coding downstream 257605 29070354 ~ 29181202 (+)
plxdc2 LOC106578707 coding downstream 394511 29207260 ~ 29383520 (+)
G1277186 NA non-coding upstream 109067 28701203 ~ 28703108 (+)
G1277178 clul1 non-coding upstream 181010 28626587 ~ 28631165 (+)
G1277177 NA non-coding upstream 185843 28625505 ~ 28626332 (+)
G1277174 clul1 non-coding upstream 191466 28619969 ~ 28620709 (+)
G1277128 NA non-coding upstream 195494 28614402 ~ 28616681 (+)
G1277277 NA non-coding downstream 434 28813183 ~ 28813383 (+)
G1277281 NA non-coding downstream 5968 28818717 ~ 28819012 (+)
G1277283 NA non-coding downstream 9174 28821923 ~ 28822261 (+)
G1277284 NA non-coding downstream 9618 28822367 ~ 28822601 (+)
G1277212 NA non-coding downstream 110817 28923566 ~ 28966144 (+)
G1277159 NA other upstream 187957 28574316 ~ 28624218 (+)
G1276733 NA other upstream 555769 28190186 ~ 28256406 (+)
G1276288 NA other upstream 958162 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1710148 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1849949 26960749 ~ 26974049 (+)
G1277279 NA other downstream 2617 28815366 ~ 28815810 (+)
G1279349 NA other downstream 1490284 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1583118 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2131422 30944171 ~ 30947330 (+)
G1281462 NA other downstream 3183418 31996167 ~ 31996513 (+)

Expression


Co-expression Network