G1277212


Basic Information

Item Value
gene id G1277212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28923566 ~ 28966144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458726
tgccgcggtcctccccctcttcaaagggggagacactctagacccaaactgctacagacctatatctatcctaccctgcatctctaaggtcttcgaaagccaagttaacaaacagattactgaccattttgaatcacatcgtaccttctccgctatgcaatctggtttcagagctggtcatgggtgaacctcagccacgctcaaggtcctaaacgatatcataaccaccatcgataagagacattactgtgcagccgtattcatcgactacaaatacctaggtgtctggtgagactgtaaactctccttccagcctCACATTAAGCACctgcaatccaaaattaaatctcgaatcggcttcctatttcgcaacaaagcatccttcactcatgctgccaaacatacgttcgtaaaactgaccatcctaccgatcctcgacttctgcgatgtcatttgtaaaatagcctccaacactctactcaacaaattggatgctgtctatcacagtgccatccattttctcaccaaagccccatatattacccatcactgcgacctgtactctctcgttggctggccatcgcttcatacttgtcgccaaacccactggctccaggtcatatacaagtctctgctaggtaaagcccctccttatctcagctcactggtcaccatagcaacacccacccgtagcacgcgatccagcaggtatattttactggtcacccccaaagccgaTTCCTtttttggccacctctccttccagttctctgctgccaatgactggaacgaactgcaaaagtcactgaagctggagactcttatctccctcactagctttaagcaccagctgtcagagcagctcacagatcactgcacttgTACACCATTTATAAACAGCCCattcaactacctcatccccatactgtatttatttattttgctcctttgcaccacagtatctctatttgcacattgatcttctgcacatctaccagtcctgtgtttaattgctatattgtaattacttcaccaccatggcctatttattgccttacctactTATTTAGTACCttaccttatttgcactcactgtatatagacttttcttttttttctactgtattattgactgtatgtttgtaattccatgtgtaattatgtgttgttgtatgtgtcgaactgctgtgctttatcttggccaggtcgcagttgcaaatgagaacttgttctctactagtctacctggttaaataaaggtgaaataaataaataaaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458726 True 1282 lncRNA 0.44 2 28923566 28966144

Neighbor

gene id symbol gene type direction distance location
LOC110489950 LOC106590132 coding upstream 86270 28826580 ~ 28837296 (+)
LOC110489949 mrc1 coding upstream 111504 28795080 ~ 28812062 (+)
LOC110489948 mrc1 coding upstream 146477 28756788 ~ 28777089 (+)
LOC110490831 LOC106590071 coding upstream 182090 28731076 ~ 28741476 (+)
LOC100136716 LOC106590136 coding upstream 224610 28637747 ~ 28698956 (+)
arl8 LOC106590131 coding downstream 17335 28983479 ~ 28996322 (+)
malrd1 malrd1 coding downstream 104210 29070354 ~ 29181202 (+)
plxdc2 LOC106578707 coding downstream 241116 29207260 ~ 29383520 (+)
zfand1 zfand1 coding downstream 439152 29405296 ~ 29415105 (+)
prlh2 crfa coding downstream 456250 29422394 ~ 29426818 (+)
G1277284 NA non-coding upstream 100965 28822367 ~ 28822601 (+)
G1277283 NA non-coding upstream 101305 28821923 ~ 28822261 (+)
G1277281 NA non-coding upstream 104554 28818717 ~ 28819012 (+)
G1277277 NA non-coding upstream 110183 28813183 ~ 28813383 (+)
G1277276 NA non-coding upstream 110817 28812175 ~ 28812749 (+)
G1277396 NA non-coding downstream 49159 29015303 ~ 29015534 (+)
G1277397 NA non-coding downstream 49593 29015737 ~ 29015958 (+)
G1277400 NA non-coding downstream 52098 29018242 ~ 29018608 (+)
G1277408 NA non-coding downstream 60932 29027076 ~ 29027307 (+)
G1277726 NA non-coding downstream 73882 29040026 ~ 29040277 (+)
G1277279 NA other upstream 107756 28815366 ~ 28815810 (+)
G1277159 NA other upstream 299348 28574316 ~ 28624218 (+)
G1276733 NA other upstream 667160 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1069553 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1821539 27101309 ~ 27102027 (+)
G1279349 NA other downstream 1336889 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1429723 30395817 ~ 30416375 (+)
G1279833 NA other downstream 1978027 30944171 ~ 30947330 (+)
G1281462 NA other downstream 3030023 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3721414 32687558 ~ 32698036 (+)

Expression


Co-expression Network