G1277396


Basic Information

Item Value
gene id G1277396
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29015303 ~ 29015534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458915
gataATAAcaatggatggcagaaagcttggccccggtgatgtactgggtggtacgcactaccctctgtagtaccttgcggtcagatgccgagtagttgccataccaggcagtgatgcaacccgtcaggatgctctcaatggtgcagctgtaaaaccttttgaggatctgaggacccatgccaaatattttcagtctcctgagggggattaggttttgtcgtgccctcttcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458915 True 232 lncRNA 0.51 1 29015303 29015534

Neighbor

gene id symbol gene type direction distance location
arl8 LOC106590131 coding upstream 18981 28983479 ~ 28996322 (+)
cacnb2a cacb2 coding upstream 51942 28851161 ~ 28963361 (+)
LOC110489950 LOC106590132 coding upstream 178007 28826580 ~ 28837296 (+)
LOC110489949 mrc1 coding upstream 203241 28795080 ~ 28812062 (+)
LOC110489948 mrc1 coding upstream 238214 28756788 ~ 28777089 (+)
malrd1 malrd1 coding downstream 54820 29070354 ~ 29181202 (+)
plxdc2 LOC106578707 coding downstream 191726 29207260 ~ 29383520 (+)
zfand1 zfand1 coding downstream 389762 29405296 ~ 29415105 (+)
prlh2 crfa coding downstream 406860 29422394 ~ 29426818 (+)
si:dkey-12l12.1 LOC106590121 coding downstream 589121 29604542 ~ 29632819 (+)
G1277212 NA non-coding upstream 49159 28923566 ~ 28966144 (+)
G1277284 NA non-coding upstream 192702 28822367 ~ 28822601 (+)
G1277283 NA non-coding upstream 193042 28821923 ~ 28822261 (+)
G1277281 NA non-coding upstream 196291 28818717 ~ 28819012 (+)
G1277277 NA non-coding upstream 201920 28813183 ~ 28813383 (+)
G1277397 NA non-coding downstream 203 29015737 ~ 29015958 (+)
G1277400 NA non-coding downstream 2708 29018242 ~ 29018608 (+)
G1277408 NA non-coding downstream 11542 29027076 ~ 29027307 (+)
G1277726 NA non-coding downstream 24492 29040026 ~ 29040277 (+)
G1277742 NA non-coding downstream 36428 29051962 ~ 29052163 (+)
G1277279 NA other upstream 199493 28815366 ~ 28815810 (+)
G1277159 NA other upstream 391085 28574316 ~ 28624218 (+)
G1276733 NA other upstream 758897 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1161290 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1913276 27101309 ~ 27102027 (+)
G1279349 NA other downstream 1287499 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1380333 30395817 ~ 30416375 (+)
G1279833 NA other downstream 1928637 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2980633 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3672024 32687558 ~ 32698036 (+)

Expression


Co-expression Network