G1277400


Basic Information

Item Value
gene id G1277400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29018242 ~ 29018608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458919
gattaggaaagttgttttgaaatgtttggacaaagtttacaggtaacttattagataatgtgtagtcatgtcaggcgagttggaaccggtgtttttctgaataaaatgtgccaaataaatggacattttggagatataacgacggaatttatcaaacaaaaggaccatttgtgatgtttatgggacatattggagtgccaacagaagaagctcttcaaaggtaaggcatgaattatattgttatttctgagttttgtgtcgcgcctggcgggttaaaatatgattgtcatgtgtttgtttgatggggtgctgtcctcaaataatagcatggtttgctttcgccgtaaagcctttttgaaatctgaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458919 True 367 lncRNA 0.37 1 29018242 29018608

Neighbor

gene id symbol gene type direction distance location
arl8 LOC106590131 coding upstream 21920 28983479 ~ 28996322 (+)
cacnb2a cacb2 coding upstream 54881 28851161 ~ 28963361 (+)
LOC110489950 LOC106590132 coding upstream 180946 28826580 ~ 28837296 (+)
LOC110489949 mrc1 coding upstream 206180 28795080 ~ 28812062 (+)
LOC110489948 mrc1 coding upstream 241153 28756788 ~ 28777089 (+)
malrd1 malrd1 coding downstream 51746 29070354 ~ 29181202 (+)
plxdc2 LOC106578707 coding downstream 188652 29207260 ~ 29383520 (+)
zfand1 zfand1 coding downstream 386688 29405296 ~ 29415105 (+)
prlh2 crfa coding downstream 403786 29422394 ~ 29426818 (+)
si:dkey-12l12.1 LOC106590121 coding downstream 586047 29604542 ~ 29632819 (+)
G1277397 NA non-coding upstream 2284 29015737 ~ 29015958 (+)
G1277396 NA non-coding upstream 2708 29015303 ~ 29015534 (+)
G1277212 NA non-coding upstream 52098 28923566 ~ 28966144 (+)
G1277284 NA non-coding upstream 195641 28822367 ~ 28822601 (+)
G1277283 NA non-coding upstream 195981 28821923 ~ 28822261 (+)
G1277408 NA non-coding downstream 8468 29027076 ~ 29027307 (+)
G1277726 NA non-coding downstream 21418 29040026 ~ 29040277 (+)
G1277742 NA non-coding downstream 33354 29051962 ~ 29052163 (+)
G1277746 NA non-coding downstream 41257 29059865 ~ 29060130 (+)
G1277751 NA non-coding downstream 47667 29066275 ~ 29066499 (+)
G1277279 NA other upstream 202432 28815366 ~ 28815810 (+)
G1277159 NA other upstream 394024 28574316 ~ 28624218 (+)
G1276733 NA other upstream 761836 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1164229 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1916215 27101309 ~ 27102027 (+)
G1279349 NA other downstream 1284425 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1377259 30395817 ~ 30416375 (+)
G1279833 NA other downstream 1925563 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2977559 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3668950 32687558 ~ 32698036 (+)

Expression


Co-expression Network