G1277408


Basic Information

Item Value
gene id G1277408
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29027076 ~ 29027307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1458927
caacataatacaaaataaaaaaacacgaacaacgcacagacatgaaacagaaacaataacgcctggggaaggaaccaaagggagtgacatatatagggaaggtaatcagggaagtgatggagtccaggtgagtctgatgatggtgacaggtgtgctccataacgagcagcctggtgacctagagaccggagagggagcacacatgacagaatgaatggaattcagcagtatt

Function

NR:

description
PREDICTED: interferon-induced GTP-binding protein Mx-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1458927 True 232 lncRNA 0.45 1 29027076 29027307

Neighbor

gene id symbol gene type direction distance location
arl8 LOC106590131 coding upstream 30754 28983479 ~ 28996322 (+)
cacnb2a cacb2 coding upstream 63715 28851161 ~ 28963361 (+)
LOC110489950 LOC106590132 coding upstream 189780 28826580 ~ 28837296 (+)
LOC110489949 mrc1 coding upstream 215014 28795080 ~ 28812062 (+)
LOC110489948 mrc1 coding upstream 249987 28756788 ~ 28777089 (+)
malrd1 malrd1 coding downstream 43047 29070354 ~ 29181202 (+)
plxdc2 LOC106578707 coding downstream 179953 29207260 ~ 29383520 (+)
zfand1 zfand1 coding downstream 377989 29405296 ~ 29415105 (+)
prlh2 crfa coding downstream 395087 29422394 ~ 29426818 (+)
si:dkey-12l12.1 LOC106590121 coding downstream 577348 29604542 ~ 29632819 (+)
G1277400 NA non-coding upstream 8468 29018242 ~ 29018608 (+)
G1277397 NA non-coding upstream 11118 29015737 ~ 29015958 (+)
G1277396 NA non-coding upstream 11542 29015303 ~ 29015534 (+)
G1277212 NA non-coding upstream 60932 28923566 ~ 28966144 (+)
G1277284 NA non-coding upstream 204475 28822367 ~ 28822601 (+)
G1277726 NA non-coding downstream 12719 29040026 ~ 29040277 (+)
G1277742 NA non-coding downstream 24655 29051962 ~ 29052163 (+)
G1277746 NA non-coding downstream 32558 29059865 ~ 29060130 (+)
G1277751 NA non-coding downstream 38968 29066275 ~ 29066499 (+)
G1277761 NA non-coding downstream 58086 29085393 ~ 29086178 (+)
G1277279 NA other upstream 211266 28815366 ~ 28815810 (+)
G1277159 NA other upstream 402858 28574316 ~ 28624218 (+)
G1276733 NA other upstream 770670 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1173063 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1925049 27101309 ~ 27102027 (+)
G1279349 NA other downstream 1275726 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1368560 30395817 ~ 30416375 (+)
G1279833 NA other downstream 1916864 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2968860 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3660251 32687558 ~ 32698036 (+)

Expression


Co-expression Network