Gene
RNA
| Item | Value |
|---|---|
| gene id | G1277742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 29051962 ~ 29052163 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1459307 | True | 202 | lncRNA | 0.35 | 1 | 29051962 | 29052163 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arl8 | LOC106590131 | coding | upstream | 55640 | 28983479 ~ 28996322 (+) |
| cacnb2a | cacb2 | coding | upstream | 88601 | 28851161 ~ 28963361 (+) |
| LOC110489950 | LOC106590132 | coding | upstream | 214666 | 28826580 ~ 28837296 (+) |
| LOC110489949 | mrc1 | coding | upstream | 239900 | 28795080 ~ 28812062 (+) |
| LOC110489948 | mrc1 | coding | upstream | 274873 | 28756788 ~ 28777089 (+) |
| malrd1 | malrd1 | coding | downstream | 18191 | 29070354 ~ 29181202 (+) |
| plxdc2 | LOC106578707 | coding | downstream | 155097 | 29207260 ~ 29383520 (+) |
| zfand1 | zfand1 | coding | downstream | 353133 | 29405296 ~ 29415105 (+) |
| prlh2 | crfa | coding | downstream | 370231 | 29422394 ~ 29426818 (+) |
| si:dkey-12l12.1 | LOC106590121 | coding | downstream | 552492 | 29604542 ~ 29632819 (+) |
| G1277726 | NA | non-coding | upstream | 11685 | 29040026 ~ 29040277 (+) |
| G1277408 | NA | non-coding | upstream | 24655 | 29027076 ~ 29027307 (+) |
| G1277400 | NA | non-coding | upstream | 33354 | 29018242 ~ 29018608 (+) |
| G1277397 | NA | non-coding | upstream | 36004 | 29015737 ~ 29015958 (+) |
| G1277396 | NA | non-coding | upstream | 36428 | 29015303 ~ 29015534 (+) |
| G1277746 | NA | non-coding | downstream | 7702 | 29059865 ~ 29060130 (+) |
| G1277751 | NA | non-coding | downstream | 14112 | 29066275 ~ 29066499 (+) |
| G1277761 | NA | non-coding | downstream | 33230 | 29085393 ~ 29086178 (+) |
| G1277793 | NA | non-coding | downstream | 86222 | 29138385 ~ 29139312 (+) |
| G1277917 | NA | non-coding | downstream | 142157 | 29194320 ~ 29194529 (+) |
| G1277279 | NA | other | upstream | 236152 | 28815366 ~ 28815810 (+) |
| G1277159 | NA | other | upstream | 427744 | 28574316 ~ 28624218 (+) |
| G1276733 | NA | other | upstream | 795556 | 28190186 ~ 28256406 (+) |
| G1276288 | NA | other | upstream | 1197949 | 27853618 ~ 27854013 (+) |
| G1275572 | NA | other | upstream | 1949935 | 27101309 ~ 27102027 (+) |
| G1279349 | NA | other | downstream | 1250870 | 30303033 ~ 30303419 (+) |
| htr5ab | htr5a | other | downstream | 1343704 | 30395817 ~ 30416375 (+) |
| G1279833 | NA | other | downstream | 1892008 | 30944171 ~ 30947330 (+) |
| G1281462 | NA | other | downstream | 2944004 | 31996167 ~ 31996513 (+) |
| G1282302 | NA | other | downstream | 3635395 | 32687558 ~ 32698036 (+) |
