G1277751


Basic Information

Item Value
gene id G1277751
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29066275 ~ 29066499 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459316
ggagcaggctttcatcaaggatctctctgtactttgctccgttcatctttgccttgatcctgactagtctcccagtcccggctgctgaaaaacatccccacaacatgatgatgccaccaccatgcttcactgtagggatggtgccagatttcctcaatatgtgatgcttggcattcaggtcaaagagttcactcttggtttcatcaaaccagagaatcttgtttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459316 True 225 lncRNA 0.47 1 29066275 29066499

Neighbor

gene id symbol gene type direction distance location
arl8 LOC106590131 coding upstream 69953 28983479 ~ 28996322 (+)
cacnb2a cacb2 coding upstream 102914 28851161 ~ 28963361 (+)
LOC110489950 LOC106590132 coding upstream 228979 28826580 ~ 28837296 (+)
LOC110489949 mrc1 coding upstream 254213 28795080 ~ 28812062 (+)
LOC110489948 mrc1 coding upstream 289186 28756788 ~ 28777089 (+)
malrd1 malrd1 coding downstream 3855 29070354 ~ 29181202 (+)
plxdc2 LOC106578707 coding downstream 140761 29207260 ~ 29383520 (+)
zfand1 zfand1 coding downstream 338797 29405296 ~ 29415105 (+)
prlh2 crfa coding downstream 355895 29422394 ~ 29426818 (+)
si:dkey-12l12.1 LOC106590121 coding downstream 538156 29604542 ~ 29632819 (+)
G1277746 NA non-coding upstream 6145 29059865 ~ 29060130 (+)
G1277742 NA non-coding upstream 14112 29051962 ~ 29052163 (+)
G1277726 NA non-coding upstream 25998 29040026 ~ 29040277 (+)
G1277408 NA non-coding upstream 38968 29027076 ~ 29027307 (+)
G1277400 NA non-coding upstream 47667 29018242 ~ 29018608 (+)
G1277761 NA non-coding downstream 18894 29085393 ~ 29086178 (+)
G1277793 NA non-coding downstream 71886 29138385 ~ 29139312 (+)
G1277917 NA non-coding downstream 127821 29194320 ~ 29194529 (+)
G1277920 NA non-coding downstream 129326 29195825 ~ 29196083 (+)
G1277993 LOC100136012 non-coding downstream 231064 29297563 ~ 29310123 (+)
G1277279 NA other upstream 250465 28815366 ~ 28815810 (+)
G1277159 NA other upstream 442057 28574316 ~ 28624218 (+)
G1276733 NA other upstream 809869 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1212262 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1964248 27101309 ~ 27102027 (+)
G1279349 NA other downstream 1236534 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 1329368 30395817 ~ 30416375 (+)
G1279833 NA other downstream 1877672 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2929668 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3621059 32687558 ~ 32698036 (+)

Expression


Co-expression Network