G1278129


Basic Information

Item Value
gene id G1278129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29525416 ~ 29525728 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459709
atataatacatcaataaaatcaatttagcctcaaataaataatgaaacgtgttcaatttggtttaaataatgcaaaaacaaagtgttggagaagaaagtaaaagtgcaacatgtgctatgtaagaaagctaatgtttaagttccttgctcagaacatgagaacatatgaaagccggtggttccttttaacatgagtcttcaatattcccaggtaagaagttttaggttgtagttattataggaattataggactatttccctctataccatttgtatttcattaacctttgactattggatgttcttataggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459709 True 313 lncRNA 0.31 1 29525416 29525728

Neighbor

gene id symbol gene type direction distance location
prlh2 crfa coding upstream 98598 29422394 ~ 29426818 (+)
zfand1 zfand1 coding upstream 110311 29405296 ~ 29415105 (+)
plxdc2 LOC106578707 coding upstream 141896 29207260 ~ 29383520 (+)
malrd1 malrd1 coding upstream 344214 29070354 ~ 29181202 (+)
arl8 LOC106590131 coding upstream 529094 28983479 ~ 28996322 (+)
si:dkey-12l12.1 LOC106590121 coding downstream 78927 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding downstream 86903 29612631 ~ 29614518 (+)
ackr4b LOC106590119 coding downstream 132240 29657968 ~ 29664921 (+)
LOC110489968 LOC106590118 coding downstream 163989 29689717 ~ 29695951 (+)
tgif1 LOC106590112 coding downstream 444216 29969944 ~ 29976086 (+)
G1278128 NA non-coding upstream 621 29524476 ~ 29524795 (+)
G1278115 NA non-coding upstream 18559 29506652 ~ 29506857 (+)
G1278114 NA non-coding upstream 18926 29506101 ~ 29506490 (+)
G1277993 LOC100136012 non-coding upstream 215293 29297563 ~ 29310123 (+)
G1278168 NA non-coding downstream 71882 29597610 ~ 29597889 (+)
G1278180 NA non-coding downstream 83897 29609625 ~ 29609849 (+)
G1278181 NA non-coding downstream 84901 29610629 ~ 29611090 (+)
G1278182 NA non-coding downstream 85567 29611295 ~ 29611517 (+)
G1277279 NA other upstream 709606 28815366 ~ 28815810 (+)
G1277159 NA other upstream 901198 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1269010 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1671403 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2423389 27101309 ~ 27102027 (+)
G1279349 NA other downstream 777305 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 870139 30395817 ~ 30416375 (+)
G1279833 NA other downstream 1418443 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2470439 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3161830 32687558 ~ 32698036 (+)

Expression


Co-expression Network