G1278182


Basic Information

Item Value
gene id G1278182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29611295 ~ 29611517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459764
gccggaatcgcccttcactcccgagctgccggagtctcccgtccatccggtgctgccggaatctcctgtccattcgggacccagggctagggtccccagtccaaggtcggcagcgagggtcgccgctctaaaTAGGCCATGGAGGCCGGTGAAGAGGCGGACAAaaactatggtggagtggggtccacgtcccgcgccagagccgccaccgcggacagacgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459764 True 223 lncRNA 0.67 1 29611295 29611517

Neighbor

gene id symbol gene type direction distance location
prlh2 crfa coding upstream 184477 29422394 ~ 29426818 (+)
zfand1 zfand1 coding upstream 196190 29405296 ~ 29415105 (+)
plxdc2 LOC106578707 coding upstream 227775 29207260 ~ 29383520 (+)
malrd1 malrd1 coding upstream 430093 29070354 ~ 29181202 (+)
arl8 LOC106590131 coding upstream 614973 28983479 ~ 28996322 (+)
LOC110489961 LOC106590122 coding downstream 1114 29612631 ~ 29614518 (+)
ackr4b LOC106590119 coding downstream 46451 29657968 ~ 29664921 (+)
LOC110489968 LOC106590118 coding downstream 78200 29689717 ~ 29695951 (+)
tgif1 LOC106590112 coding downstream 358427 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 718293 30329810 ~ 30345566 (+)
G1278181 NA non-coding upstream 205 29610629 ~ 29611090 (+)
G1278180 NA non-coding upstream 1446 29609625 ~ 29609849 (+)
si:dkey-12l12.1 LOC106590121 non-coding upstream 6340 29604542 ~ 29632819 (+)
G1278168 NA non-coding upstream 13406 29597610 ~ 29597889 (+)
G1278129 NA non-coding upstream 85567 29525416 ~ 29525728 (+)
G1278183 NA non-coding downstream 135 29611652 ~ 29611853 (+)
G1278185 NA non-coding downstream 6497 29618014 ~ 29618252 (+)
G1278186 NA non-coding downstream 7964 29619481 ~ 29619700 (+)
G1278187 NA non-coding downstream 8972 29620489 ~ 29620812 (+)
G1278188 NA non-coding downstream 10678 29622195 ~ 29622673 (+)
G1277279 NA other upstream 795485 28815366 ~ 28815810 (+)
G1277159 NA other upstream 987077 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1354889 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1757282 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2509268 27101309 ~ 27102027 (+)
G1279349 NA other downstream 691516 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 784350 30395817 ~ 30416375 (+)
G1279833 NA other downstream 1332654 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2384650 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3076041 32687558 ~ 32698036 (+)

Expression


Co-expression Network