Gene
RNA
| Item | Value |
|---|---|
| gene id | G1278185 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 29618014 ~ 29618252 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1459769 | True | 239 | lncRNA | 0.38 | 1 | 29618014 | 29618252 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489961 | LOC106590122 | coding | upstream | 3496 | 29612631 ~ 29614518 (+) |
| prlh2 | crfa | coding | upstream | 191196 | 29422394 ~ 29426818 (+) |
| zfand1 | zfand1 | coding | upstream | 202909 | 29405296 ~ 29415105 (+) |
| plxdc2 | LOC106578707 | coding | upstream | 234494 | 29207260 ~ 29383520 (+) |
| malrd1 | malrd1 | coding | upstream | 436812 | 29070354 ~ 29181202 (+) |
| ackr4b | LOC106590119 | coding | downstream | 39716 | 29657968 ~ 29664921 (+) |
| LOC110489968 | LOC106590118 | coding | downstream | 71465 | 29689717 ~ 29695951 (+) |
| tgif1 | LOC106590112 | coding | downstream | 351692 | 29969944 ~ 29976086 (+) |
| LOC110489977 | LOC106590110 | coding | downstream | 711558 | 30329810 ~ 30345566 (+) |
| htr5ab | htr5a | coding | downstream | 777565 | 30395817 ~ 30416375 (+) |
| G1278183 | NA | non-coding | upstream | 6161 | 29611652 ~ 29611853 (+) |
| G1278182 | NA | non-coding | upstream | 6497 | 29611295 ~ 29611517 (+) |
| G1278181 | NA | non-coding | upstream | 6924 | 29610629 ~ 29611090 (+) |
| G1278180 | NA | non-coding | upstream | 8165 | 29609625 ~ 29609849 (+) |
| si:dkey-12l12.1 | LOC106590121 | non-coding | upstream | 13059 | 29604542 ~ 29632819 (+) |
| G1278186 | NA | non-coding | downstream | 1229 | 29619481 ~ 29619700 (+) |
| G1278187 | NA | non-coding | downstream | 2237 | 29620489 ~ 29620812 (+) |
| G1278188 | NA | non-coding | downstream | 3943 | 29622195 ~ 29622673 (+) |
| G1278201 | NA | non-coding | downstream | 26548 | 29644800 ~ 29645041 (+) |
| G1278205 | NA | non-coding | downstream | 32081 | 29650333 ~ 29650568 (+) |
| G1277279 | NA | other | upstream | 802204 | 28815366 ~ 28815810 (+) |
| G1277159 | NA | other | upstream | 993796 | 28574316 ~ 28624218 (+) |
| G1276733 | NA | other | upstream | 1361608 | 28190186 ~ 28256406 (+) |
| G1276288 | NA | other | upstream | 1764001 | 27853618 ~ 27854013 (+) |
| G1275572 | NA | other | upstream | 2515987 | 27101309 ~ 27102027 (+) |
| G1279349 | NA | other | downstream | 684781 | 30303033 ~ 30303419 (+) |
| G1279833 | NA | other | downstream | 1325919 | 30944171 ~ 30947330 (+) |
| G1281462 | NA | other | downstream | 2377915 | 31996167 ~ 31996513 (+) |
| G1282302 | NA | other | downstream | 3069306 | 32687558 ~ 32698036 (+) |
