Gene
RNA
| Item | Value |
|---|---|
| gene id | G1278186 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 29619481 ~ 29619700 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1459770 | True | 220 | lncRNA | 0.46 | 1 | 29619481 | 29619700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489961 | LOC106590122 | coding | upstream | 4963 | 29612631 ~ 29614518 (+) |
| prlh2 | crfa | coding | upstream | 192663 | 29422394 ~ 29426818 (+) |
| zfand1 | zfand1 | coding | upstream | 204376 | 29405296 ~ 29415105 (+) |
| plxdc2 | LOC106578707 | coding | upstream | 235961 | 29207260 ~ 29383520 (+) |
| malrd1 | malrd1 | coding | upstream | 438279 | 29070354 ~ 29181202 (+) |
| ackr4b | LOC106590119 | coding | downstream | 38268 | 29657968 ~ 29664921 (+) |
| LOC110489968 | LOC106590118 | coding | downstream | 70017 | 29689717 ~ 29695951 (+) |
| tgif1 | LOC106590112 | coding | downstream | 350244 | 29969944 ~ 29976086 (+) |
| LOC110489977 | LOC106590110 | coding | downstream | 710110 | 30329810 ~ 30345566 (+) |
| htr5ab | htr5a | coding | downstream | 776117 | 30395817 ~ 30416375 (+) |
| G1278185 | NA | non-coding | upstream | 1229 | 29618014 ~ 29618252 (+) |
| G1278183 | NA | non-coding | upstream | 7628 | 29611652 ~ 29611853 (+) |
| G1278182 | NA | non-coding | upstream | 7964 | 29611295 ~ 29611517 (+) |
| G1278181 | NA | non-coding | upstream | 8391 | 29610629 ~ 29611090 (+) |
| G1278180 | NA | non-coding | upstream | 9632 | 29609625 ~ 29609849 (+) |
| G1278187 | NA | non-coding | downstream | 789 | 29620489 ~ 29620812 (+) |
| G1278188 | NA | non-coding | downstream | 2495 | 29622195 ~ 29622673 (+) |
| G1278201 | NA | non-coding | downstream | 25100 | 29644800 ~ 29645041 (+) |
| G1278205 | NA | non-coding | downstream | 30633 | 29650333 ~ 29650568 (+) |
| G1278229 | NA | non-coding | downstream | 63904 | 29683604 ~ 29684155 (+) |
| G1277279 | NA | other | upstream | 803671 | 28815366 ~ 28815810 (+) |
| G1277159 | NA | other | upstream | 995263 | 28574316 ~ 28624218 (+) |
| G1276733 | NA | other | upstream | 1363075 | 28190186 ~ 28256406 (+) |
| G1276288 | NA | other | upstream | 1765468 | 27853618 ~ 27854013 (+) |
| G1275572 | NA | other | upstream | 2517454 | 27101309 ~ 27102027 (+) |
| G1279349 | NA | other | downstream | 683333 | 30303033 ~ 30303419 (+) |
| G1279833 | NA | other | downstream | 1324471 | 30944171 ~ 30947330 (+) |
| G1281462 | NA | other | downstream | 2376467 | 31996167 ~ 31996513 (+) |
| G1282302 | NA | other | downstream | 3067858 | 32687558 ~ 32698036 (+) |
