G1278201


Basic Information

Item Value
gene id G1278201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29644800 ~ 29645041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459785
gatagatatacACCAAATATTTCCTGTTTTGCAGCTTCGATGCTCTTGGAGCCTGATGTTGTTGTCGCCAAGGAGCGTTCGGACTCAgtcgggaccaggtttcagctgctgcgcaacgctgacatccttcctcccataaaTGGTCTGCCTGTAAAAGCACCAGCTGGACTAGACACAGCtagaaaaacatatatttttgagAAGATCAAGTCGTTTTGAGACAAAGAGGCTttggacatcac

Function

NR:

description
hypothetical protein cypCar_00046843

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459785 True 242 lncRNA 0.46 1 29644800 29645041

Neighbor

gene id symbol gene type direction distance location
si:dkey-12l12.1 LOC106590121 coding upstream 11981 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 30282 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 217982 29422394 ~ 29426818 (+)
zfand1 zfand1 coding upstream 229695 29405296 ~ 29415105 (+)
plxdc2 LOC106578707 coding upstream 261280 29207260 ~ 29383520 (+)
ackr4b LOC106590119 coding downstream 12927 29657968 ~ 29664921 (+)
LOC110489968 LOC106590118 coding downstream 44676 29689717 ~ 29695951 (+)
tgif1 LOC106590112 coding downstream 324903 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 684769 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 750776 30395817 ~ 30416375 (+)
G1278188 NA non-coding upstream 22127 29622195 ~ 29622673 (+)
G1278187 NA non-coding upstream 23988 29620489 ~ 29620812 (+)
G1278186 NA non-coding upstream 25100 29619481 ~ 29619700 (+)
G1278185 NA non-coding upstream 26548 29618014 ~ 29618252 (+)
G1278183 NA non-coding upstream 32947 29611652 ~ 29611853 (+)
G1278205 NA non-coding downstream 5292 29650333 ~ 29650568 (+)
G1278229 NA non-coding downstream 38563 29683604 ~ 29684155 (+)
G1278230 NA non-coding downstream 40233 29685274 ~ 29685579 (+)
G1278231 NA non-coding downstream 42180 29687221 ~ 29687582 (+)
G1278232 NA non-coding downstream 42884 29687925 ~ 29690069 (+)
G1277279 NA other upstream 828990 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1020582 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1388394 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1790787 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2542773 27101309 ~ 27102027 (+)
G1279349 NA other downstream 657992 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1299130 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2351126 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3042517 32687558 ~ 32698036 (+)

Expression


Co-expression Network